当前解析结果
SmilChr02G005185| 统一新 Gene ID | SmilChr02G005185 |
|---|---|
| 名称 | SmilChr02G005185 |
| 描述 | uncharacterized SmilChr02G005185 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 73167891 - 73170879 / + |
| NCBI Gene ID | LOC131009178 |
|---|---|
| GeneID | 131009178 |
| locus_tag | - |
| NCBI Name | LOC131009178 |
| 原始查询 | SmilChr02G005185 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824980]; symbol=AT3G58110; hit=AT3G58110; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824980]; symbol=AT3G58110; hit=AT3G58110; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G58110 (AT3G58110)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824980] identity=35.2; qcov=0.987; evalue=1.07e-103; confidence=medium |
| Rice | Os06g0538200- identity=26.3; qcov=0.441; evalue=9.57e-21; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009178 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057792407.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057792407.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057792407.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057792407.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057792407.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:73168178 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B102,B118,B65 |
Chr2:73168422 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C11,C69 |
Chr2:73168522 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,B113 |
Chr2:73168628 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
Chr2:73168651 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,B113 |
Chr2:73168776 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B28 |
Chr2:73168779 |
TG |
T |
1bp_deletion | frameshift_variant | 1 | B131 |
Chr2:73168779 |
TG |
T |
1bp_deletion | CDS_variant | 1 | B131 |
Chr2:73168880 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A23,C49,C79,C80 |
Chr2:73169008 |
A |
ACG |
2bp_insertion | frameshift_variant | 1 | C79 |
Chr2:73169008 |
A |
ACG |
2bp_insertion | CDS_variant | 1 | C79 |
Chr2:73169009 |
GAA |
G |
2bp_deletion | frameshift_variant | 1 | C79 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。