Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G005245`

染色体: Chr02 坐标: 73605015-73607992 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G005245`
名称	SmilChr02G005245
描述	ADP,ATP carrier protein 1, mitochondrial-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	73605015 - 73607992 / `-`

ID 对照

NCBI Gene ID	`LOC131009251`
GeneID	`131009251`
locus_tag	`-`
NCBI Name	`LOC131009251`
原始查询	`SmilChr02G005245`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	ADP,ATP carrier protein 1, mitochondrial-like
产物	ADP%2CATP carrier protein 1%2C mitochondrial-like
Arabidopsis	`AT4G28390` (AAC3) ADP/ATP carrier 3 [Source:NCBI gene (formerly Entrezgene);Acc:828955] identity=79.3; qcov=0.979; evalue=0; confidence=high
Rice	`Os05g0302700` - identity=76.6; qcov=1; evalue=0; confidence=high
GO	GO:0005471 (ATP:ADP antiporter activity); GO:0005743 (mitochondrial inner membrane); GO:0140021 (mitochondrial ADP transmembrane transport); GO:1990544 (mitochondrial ATP transmembrane transport)
KEGG	-
Pfam	PF00153 (Mito_carr)
InterPro	-
eggNOG	-
NR	GeneID:131009251

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057792506.1`
2	Mitochondrion membrane	线粒体膜	1.00000	`XP_057792506.1`
3	Mitochondrion inner membrane	线粒体内膜	1.00000	`XP_057792506.1`
4	Nucleus	细胞核	0.00000	`XP_057792506.1`
5	Chromosome	染色体	0.00000	`XP_057792506.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:73605270`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	C11,C53,C69
`Chr2:73605323`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B32
`Chr2:73605448`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B87
`Chr2:73605480`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B64
`Chr2:73605525`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B74,C58
`Chr2:73605875`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A11,A6,C33,D8
`Chr2:73605927`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B88,C27
`Chr2:73605942`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B136
`Chr2:73605943`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B78,B82,D10,D8
`Chr2:73605944`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B78,B82,D10,D8
`Chr2:73605973`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A20,B123,B48,B62,C83
`Chr2:73606073`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B35

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057792506.1

410 aa

205

410

Mito_carr

PF00153 Mito_carr 108-204 aa PF00153 Mito_carr 212-305 aa PF00153 Mito_carr 312-401 aa

XP_057792507.1

403 aa

202

403

Mito_carr

PF00153 Mito_carr 101-197 aa PF00153 Mito_carr 205-298 aa PF00153 Mito_carr 305-394 aa

XP_057792508.1

398 aa

199

398

Mito_carr

PF00153 Mito_carr 96-192 aa PF00153 Mito_carr 200-293 aa PF00153 Mito_carr 300-389 aa

XP_057792509.1

393 aa

196

393

Mito_carr

PF00153 Mito_carr 91-187 aa PF00153 Mito_carr 195-288 aa PF00153 Mito_carr 295-384 aa

XP_057792510.1

385 aa

192

385

Mito_carr

PF00153 Mito_carr 83-179 aa PF00153 Mito_carr 187-280 aa PF00153 Mito_carr 287-376 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057792506.1`	Pfam	`PF00153`	Mito_carr	Repeat	108	204	2.3e-69	229.9	Mitochondrial carrier protein
`XP_057792506.1`	Pfam	`PF00153`	Mito_carr	Repeat	212	305	2.3e-69	229.9	Mitochondrial carrier protein
`XP_057792506.1`	Pfam	`PF00153`	Mito_carr	Repeat	312	401	2.3e-69	229.9	Mitochondrial carrier protein
`XP_057792507.1`	Pfam	`PF00153`	Mito_carr	Repeat	101	197	2.1e-69	230.0	Mitochondrial carrier protein
`XP_057792507.1`	Pfam	`PF00153`	Mito_carr	Repeat	205	298	2.1e-69	230.0	Mitochondrial carrier protein
`XP_057792507.1`	Pfam	`PF00153`	Mito_carr	Repeat	305	394	2.1e-69	230.0	Mitochondrial carrier protein
`XP_057792508.1`	Pfam	`PF00153`	Mito_carr	Repeat	96	192	2e-69	230.1	Mitochondrial carrier protein
`XP_057792508.1`	Pfam	`PF00153`	Mito_carr	Repeat	200	293	2e-69	230.1	Mitochondrial carrier protein
`XP_057792508.1`	Pfam	`PF00153`	Mito_carr	Repeat	300	389	2e-69	230.1	Mitochondrial carrier protein
`XP_057792509.1`	Pfam	`PF00153`	Mito_carr	Repeat	91	187	1.8e-69	230.2	Mitochondrial carrier protein
`XP_057792509.1`	Pfam	`PF00153`	Mito_carr	Repeat	195	288	1.8e-69	230.2	Mitochondrial carrier protein
`XP_057792509.1`	Pfam	`PF00153`	Mito_carr	Repeat	295	384	1.8e-69	230.2	Mitochondrial carrier protein
`XP_057792510.1`	Pfam	`PF00153`	Mito_carr	Repeat	83	179	1.7e-69	230.4	Mitochondrial carrier protein
`XP_057792510.1`	Pfam	`PF00153`	Mito_carr	Repeat	187	280	1.7e-69	230.4	Mitochondrial carrier protein
`XP_057792510.1`	Pfam	`PF00153`	Mito_carr	Repeat	287	376	1.7e-69	230.4	Mitochondrial carrier protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057936525.1
TCATTATCTCCAACACACATTTCGCCACAGTTTCATGGCAATGTCGCAATTCTGCTTAAACCGCAGGGTGAGATCTGTCACTCCACTAAACCCTAGCCTTCTACCGCACTCCTCCACTCATCTTTACATTTCATAAATTCTCAAAAAAATTCTCAAAAAAATTCAGTTTCTGGATGATCCTCCACTCCTCTCGCAGGTTATGCTTGAGTTATTCCATGTCACTGCACTGCCTGCAAACATGGAGGACATAATGCGACCCT...

XM_057936526.1
TCATTATCTCCAACACACATTTCGCCACAGTTTCATGGCAATGTCGCAATTCTGCTTAAACCGCAGGGTGAGATCTGTCACTCCACTAAACCCTAGCCTTCTACCGCACTCCTCCACTCATCTTTACATTTCATAAATTCTCAAAAAAATTCTCAAAAAAATTCAGTTTCTGGATGATCCTCCACTCCTCTCGCAGGTTATGCTTGAGTTATTCCATGTGCGTGGCTCTGTATATAGTTCTGGAGTGAAGATATGGTCAC...

CDS

5 records

下载 CDS FASTA

LOC131009251
ATGCGCGGTAGTGATAGTGGATTGAGTTGTACAGTCACTGCACTGCCTGCAAACATGGAGGACATAATGCGACCCTTGTCGACGTACCAAAAGATACAGGGCCAATCTCATCTCTTTTCTTGTATTTCTCCTCACACACACTCTAGAAATGCTGGTGTGCACTCTTCGGCCGGTGCATATGTAAATGTAGGACTGCGGACTTTTACCATGCCGTTAAGCCCGGGAGCTTCCAGGGAAATTGTTTCACCAGCCTCTCCTTT...

LOC131009251
ATGCGCGGTAGTGATAGTGGATTGAGTTGTACAGTTATGCTTGAGTTATTCCATGTCACTGCACTGCCTGCAAACATGGAGGACATAATGCGACCCTTGTCGACGTACCAAAAGATACAGGGCCAATCTCATCTCTTTTCTTGTATTTCTCCTCACACACACTCTAGAAATGCTGGTGTGCACTCTTCGGCCGGTGCATATGTAAATGTAGGACTGCGGACTTTTACCATGCCGTTAAGCCCGGGAGCTTCCAGGGAAAT...

Protein

5 records

下载 Protein FASTA

XP_057792506.1
MRGSDSGLSCTVMLELFHVTALPANMEDIMRPLSTYQKIQGQSHLFSCISPHTHSRNAGVHSSAGAYVNVGLRTFTMPLSPGASREIVSPASPFIIPSPAEEGKTFSSFMVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIRAGRLSEPYKGISDCFARTIKDEGVLALWRGNTANVIRYFPTQALNFAFKDYFKKLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDFARTRLANDAKAAKKGGQRQFDGL...

XP_057792507.1
MRGSDSGLSCTVTALPANMEDIMRPLSTYQKIQGQSHLFSCISPHTHSRNAGVHSSAGAYVNVGLRTFTMPLSPGASREIVSPASPFIIPSPAEEGKTFSSFMVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIRAGRLSEPYKGISDCFARTIKDEGVLALWRGNTANVIRYFPTQALNFAFKDYFKKLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDFARTRLANDAKAAKKGGQRQFDGLIDVYKKT...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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