当前解析结果
SmilChr02G005265| 统一新 Gene ID | SmilChr02G005265 |
|---|---|
| 名称 | SmilChr02G005265 |
| 描述 | uncharacterized SmilChr02G005265 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 73744097 - 73744777 / - |
| NCBI Gene ID | LOC131009976 |
|---|---|
| GeneID | 131009976 |
| locus_tag | - |
| NCBI Name | LOC131009976 |
| 原始查询 | SmilChr02G005265 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | microtubule-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:828946]; symbol=AT4G28310; hit=AT4G28310; species=arabidopsis; confidence=medium |
| 产物 | microtubule-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:828946]; symbol=AT4G28310; hit=AT4G28310; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G28310 (AT4G28310)microtubule-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:828946] identity=45.8; qcov=1; evalue=1.33e-48; confidence=medium |
| Rice | Os06g0115700 (OSJNBa0019F11.18-1)- identity=71.6; qcov=0.327; evalue=5.39e-33; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009976 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057793354.1 |
| 2 | Nucleoplasm | 核质 | 0.20000 | XP_057793354.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057793354.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057793354.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057793354.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:73744120 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr2:73744135 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B49,B65,B99 |
Chr2:73744140 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr2:73744162 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B49,B65,B99 |
Chr2:73744193 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B105,B126,C39,C4,C44 |
Chr2:73744208 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C43 |
Chr2:73744221 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B102,B32,C39 |
Chr2:73744233 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B52,B54,B82,C32,C68 |
Chr2:73744240 |
CG |
C |
1bp_deletion | frameshift_variant | 1 | B81 |
Chr2:73744240 |
CG |
C |
1bp_deletion | CDS_variant | 1 | B81 |
Chr2:73744349 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B5,C45,C9 |
Chr2:73744400 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B55 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。