当前解析结果
SmilChr02G005297| 统一新 Gene ID | SmilChr02G005297 |
|---|---|
| 名称 | SmilChr02G005297 |
| 描述 | diacylglycerol kinase 5-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 73935165 - 73939391 / - |
| NCBI Gene ID | LOC131009221 |
|---|---|
| GeneID | 131009221 |
| locus_tag | - |
| NCBI Name | LOC131009221 |
| 原始查询 | SmilChr02G005297 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | diacylglycerol kinase 5-like |
| 产物 | diacylglycerol kinase 5-like |
| Arabidopsis | AT2G20900 (DGK5)diacylglycerol kinase 5 [Source:NCBI gene (formerly Entrezgene);Acc:816624] identity=71.6; qcov=1.01; evalue=0; confidence=high |
| Rice | Os04g0634700 (OsBIDK1)- identity=66.2; qcov=1; evalue=0; confidence=high |
| GO | GO:0004143 (ATP-dependent diacylglycerol kinase activity); GO:0007205 (GO:0007205) |
| KEGG | smil00561 (Glycerolipid metabolism - Salvia miltiorrhiza (redroot sage)); smil00564 (Glycerophospholipid metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil04070 (Phosphatidylinositol signaling system - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00609 (DAGK_acc); PF00781 (DAGK_cat) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009221 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 0.80000 | XP_057792463.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057792463.1 |
| 3 | Mitochondrion | 线粒体 | 0.20000 | XP_057792463.1 |
| 4 | Mitochondrion outer membrane | 线粒体外膜 | 0.20000 | XP_057792463.1 |
| 5 | Membrane raft | 膜筏 | 0.20000 | XP_057792463.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:73935484 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B107,B12,B124,B7,B70 |
Chr2:73935559 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B135 |
Chr2:73935718 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B28,B3,B42,B43,D10 |
Chr2:73935727 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B28,B3,B42,B43 |
Chr2:73935960 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A5,B108,C78 |
Chr2:73936016 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B107,B12,B124,B7 |
Chr2:73936345 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A14,C21,C73,C77 |
Chr2:73937331 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr2:73937333 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr2:73937933 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B118,B8,C43 |
Chr2:73938397 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C39 |
Chr2:73938470 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A5,B108,C78 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057792463.1PF00781
DAGK_cat 38-159 aa
PF00609
DAGK_acc 229-403 aa
XP_057792464.1PF00781
DAGK_cat 38-159 aa
PF00609
DAGK_acc 229-403 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057792463.1 |
Pfam | PF00781 |
DAGK_cat | Family | 38 | 159 | 2.9e-19 | 69.6 | Diacylglycerol kinase catalytic domain |
XP_057792463.1 |
Pfam | PF00609 |
DAGK_acc | Family | 229 | 403 | 1.1e-38 | 133.9 | Diacylglycerol kinase accessory domain |
XP_057792464.1 |
Pfam | PF00781 |
DAGK_cat | Family | 38 | 159 | 2.9e-19 | 69.6 | Diacylglycerol kinase catalytic domain |
XP_057792464.1 |
Pfam | PF00609 |
DAGK_acc | Family | 229 | 403 | 1.1e-38 | 133.9 | Diacylglycerol kinase accessory domain |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。