Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G005363`

染色体: Chr02 坐标: 74341412-74344936 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G005363`
名称	SmilChr02G005363
描述	glucose-6-phosphate/phosphate translocator 2, chloroplastic-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	74341412 - 74344936 / `-`

ID 对照

NCBI Gene ID	`LOC131009253`
GeneID	`131009253`
locus_tag	`-`
NCBI Name	`LOC131009253`
原始查询	`SmilChr02G005363`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glucose-6-phosphate/phosphate translocator 2, chloroplastic-like
产物	glucose-6-phosphate/phosphate translocator 2%2C chloroplastic-like
Arabidopsis	`AT1G61800` (GPT2) glucose-6-phosphate/phosphate translocator 2 [Source:NCBI gene (formerly Entrezgene);Acc:842477] identity=79.3; qcov=0.91; evalue=0; confidence=high
Rice	`Os08g0187800` (OsGPT1) - identity=74.6; qcov=0.904; evalue=0; confidence=high
GO	GO:0005794 (Golgi apparatus); GO:0015120 (phosphoglycerate transmembrane transporter activity); GO:0015297 (antiporter activity); GO:0016020 (membrane); GO:0055085 (transmembrane transport); GO:0071917 (triose-phosphate transmembrane transporter activity)
KEGG	-
Pfam	PF00892 (EamA); PF03151 (TPT)
InterPro	-
eggNOG	-
NR	GeneID:131009253

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057792512.1`
2	Chloroplast membrane	叶绿体膜	1.00000	`XP_057792512.1`
3	Nucleus	细胞核	0.00000	`XP_057792512.1`
4	Chromosome	染色体	0.00000	`XP_057792512.1`
5	Centromere	着丝粒	0.00000	`XP_057792512.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:74342569`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B41,B69
`Chr2:74342580`	`GA`	`G`	1bp_deletion	frameshift_variant	25	A14,A2,A25,B1,B113,B118,B121,B127,B131,B136,B37,B54,B57,B60,B64,B7,B76,B79,B81,B86,C16,C20,C27,C35,C74
`Chr2:74342719`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C39
`Chr2:74342747`	`TC`	`T`	1bp_deletion	frameshift_variant	1	B59
`Chr2:74342747`	`TC`	`T`	1bp_deletion	CDS_variant	1	B59
`Chr2:74342749`	`AT`	`A`	1bp_deletion	frameshift_variant	2	B59,D2
`Chr2:74342749`	`AT`	`A`	1bp_deletion	CDS_variant	2	B59,D2
`Chr2:74342798`	`TG`	`T`	1bp_deletion	frameshift_variant	1	C70
`Chr2:74342798`	`TG`	`T`	1bp_deletion	CDS_variant	1	C70
`Chr2:74343324`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C49
`Chr2:74343642`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B65
`Chr2:74343663`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A18,A4,B30

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057792512.1

398 aa

199

398

TPT

EamA

PF03151 TPT 94-383 aa PF00892 EamA 104-228 aa

XP_057792513.1

387 aa

194

387

TPT

EamA

PF03151 TPT 94-383 aa PF00892 EamA 104-228 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057792512.1`	Pfam	`PF03151`	TPT	Family	94	383	1.8e-111	372.9	Triose-phosphate Transporter family
`XP_057792512.1`	Pfam	`PF00892`	EamA	Domain	104	228	5.7e-13	50.0	EamA-like transporter family
`XP_057792513.1`	Pfam	`PF03151`	TPT	Family	94	383	1.6e-111	373.0	Triose-phosphate Transporter family
`XP_057792513.1`	Pfam	`PF00892`	EamA	Domain	104	228	5.1e-13	50.2	EamA-like transporter family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057936530.1
AAAACTCCAAGACCATATGTTATCACCAACCAAATTAGGTAAACATAGAAGGAGGCATACCAATACAAGTCCATACCAATACAAGTCCAACTTGGTTATTCAAAATCAAAATCTACAATAAATCCAAACCTCCAAAAATTGGACATTTCCAACGAAGCTACAACCAAATTGCATACAAATTCACCCCTCCTTGCCTTTGCCTCTTCCAACCTGTTGATAGGCGGTAGATAAACCCCAACCCTAACCTACCCGAGAGGCCG...

XM_057936529.1
AAAACTCCAAGACCATATGTTATCACCAACCAAATTAGGTAAACATAGAAGGAGGCATACCAATACAAGTCCATACCAATACAAGTCCAACTTGGTTATTCAAAATCAAAATCTACAATAAATCCAAACCTCCAAAAATTGGACATTTCCAACGAAGCTACAACCAAATTGCATACAAATTCACCCCTCCTTGCCTTTGCCTCTTCCAACCTGTTGATAGGCGGTAGATAAACCCCAACCCTAACCTACCCGAGAGGCCG...

CDS

2 records

下载 CDS FASTA

LOC131009253
ATGGCTTTCTCACCAAATCAATCCTACACAACCGCAAACCTACTCAAGAAATCCCTTTTCCTCCCCAAACCTCAAGCTCTCCAAACATTGTACCATCCGAAGAGAAATGTGCACCTCCACAAGCCGTTGCACATCTCGGCCGCCACGGGGTTCGCCTCCGTGGCCGGGCCCGAGGACTCCTCCCCGAGAGCCGGGGCGGCCCGGTGCAACGCCTACGAGGCCCGGTCGCAGCCCGTCCCGATCAGCATTGAGTTCGACCG...

Protein

2 records

下载 Protein FASTA

XP_057792512.1
MAFSPNQSYTTANLLKKSLFLPKPQALQTLYHPKRNVHLHKPLHISAATGFASVAGPEDSSPRAGAARCNAYEARSQPVPISIEFDREGAAQKLKIGAYFATWWALNVVFNIYNKKVLNAFPFPWLTSTLSLAAGSLLMLATWASRIAPAPDTDLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFTVLVSRFMLGEAFSLPVYLSLLPIIGGCALSAATELNFNLTGFMGAMLSNLAFVFRNIFSKRG...

XP_057792513.1
MAFSPNQSYTTANLLKKSLFLPKPQALQTLYHPKRNVHLHKPLHISAATGFASVAGPEDSSPRAGAARCNAYEARSQPVPISIEFDREGAAQKLKIGAYFATWWALNVVFNIYNKKVLNAFPFPWLTSTLSLAAGSLLMLATWASRIAPAPDTDLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFTVLVSRFMLGEAFSLPVYLSLLPIIGGCALSAATELNFNLTGFMGAMLSNLAFVFRNIFSKRG...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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