当前解析结果
SmilChr02G005368| 统一新 Gene ID | SmilChr02G005368 |
|---|---|
| 名称 | SmilChr02G005368 |
| 描述 | uncharacterized SmilChr02G005368 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 74368868 - 74371897 / - |
| NCBI Gene ID | LOC131009348 |
|---|---|
| GeneID | 131009348 |
| locus_tag | - |
| NCBI Name | LOC131009348 |
| 原始查询 | SmilChr02G005368 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817813]; symbol=AT2G32520; hit=AT2G32520; species=arabidopsis; confidence=high |
| 产物 | alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817813]; symbol=AT2G32520; hit=AT2G32520; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G32520 (AT2G32520)alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817813] identity=74.4; qcov=0.929; evalue=4.96e-142; confidence=high |
| Rice | Os01g0531500- identity=75.4; qcov=0.865; evalue=5.62e-137; confidence=high |
| GO | GO:0016787 (hydrolase activity) |
| KEGG | - |
| Pfam | PF01738 (DLH) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009348 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057792627.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057792627.1 |
| 3 | Mitochondrion matrix | 线粒体基质 | 0.20000 | XP_057792627.1 |
| 4 | Chloroplast | 叶绿体 | 0.20000 | XP_057792627.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057792627.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:74369033 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B12,C38,C79 |
Chr2:74369054 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B100,B3 |
Chr2:74369057 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B6 |
Chr2:74369099 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B101,C45 |
Chr2:74369108 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A15 |
Chr2:74369126 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B12,C38,C79 |
Chr2:74369173 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B101,C45 |
Chr2:74370008 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B122 |
Chr2:74370025 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B12,B49,B60,C38,C79 |
Chr2:74370087 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A21,B24,B37,C15 |
Chr2:74370101 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B12,C38,C79 |
Chr2:74370662 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057792627.1PF01738
DLH 60-279 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057792627.1 |
Pfam | PF01738 |
DLH | Domain | 60 | 279 | 4.1e-57 | 194.0 | Dienelactone hydrolase family |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。