Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G005459`

染色体: Chr02 坐标: 74903330-74910479 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G005459`
名称	SmilChr02G005459
描述	triacylglycerol lipase 2-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	74903330 - 74910479 / `+`

ID 对照

NCBI Gene ID	`LOC131009420`
GeneID	`131009420`
locus_tag	`-`
NCBI Name	`LOC131009420`
原始查询	`SmilChr02G005459`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	triacylglycerol lipase 2-like
产物	triacylglycerol lipase 2-like
Arabidopsis	`AT5G14180` (MPL1) Myzus persicae-induced lipase 1 [Source:NCBI gene (formerly Entrezgene);Acc:831268] identity=40.1; qcov=1.11; evalue=4.05e-94; confidence=medium
Rice	`Os08g0529800` - identity=40.8; qcov=1.15; evalue=7.51e-82; confidence=medium
GO	GO:0006629 (lipid metabolic process); GO:0016788 (hydrolase activity, acting on ester bonds)
KEGG	smil00100 (Steroid biosynthesis - Salvia miltiorrhiza (redroot sage)); smil04142 (Lysosome biogenesis - Salvia miltiorrhiza (redroot sage)); smil04148 (Efferocytosis - Salvia miltiorrhiza (redroot sage))
Pfam	PF00561 (Abhydrolase_1); PF04083 (Abhydro_lipase)
InterPro	-
eggNOG	-
NR	GeneID:131009420

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Secreted	分泌到胞外	1.00000	`XP_057792719.1`
2	Lysosome	溶酶体	0.20000	`XP_057792719.1`
3	Vacuole	液泡	0.20000	`XP_057792720.1`
4	Nucleus	细胞核	0.00000	`XP_057792719.1`
5	Chromosome	染色体	0.00000	`XP_057792719.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:74903408`	`C`	`CAT`	2bp_insertion	frameshift_variant	14	A20,A6,B140,B22,B34,B69,B8,B83,B86,B92,C4,C61,C76,D6
`Chr2:74903411`	`C`	`CAT`	2bp_insertion	frameshift_variant	2	B115,C46
`Chr2:74903411`	`C`	`CAT`	2bp_insertion	CDS_variant	2	B115,C46
`Chr2:74903418`	`GAC`	`G`	2bp_deletion	frameshift_variant	13	B101,B118,B125,B139,B17,B30,B36,B50,B62,B63,B8,C58,C79
`Chr2:74903421`	`GA`	`G`	1bp_deletion	frameshift_variant	14	B101,B118,B125,B127,B139,B17,B30,B36,B50,B62,B63,B8,C58,C79
`Chr2:74903443`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B108,C23
`Chr2:74903446`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B115,B125,C46,C58,C79
`Chr2:74903474`	`GA`	`G`	1bp_deletion	frameshift_variant	2	B6,C72
`Chr2:74903474`	`GA`	`G`	1bp_deletion	CDS_variant	2	B6,C72
`Chr2:74903559`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A15,B108,C23
`Chr2:74906844`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A15,D10
`Chr2:74906858`	`G`	`GTT`	2bp_insertion	frameshift_variant	128	A11,A13,A15,A16,A2,A21,A22,A3,A4,A8,B10,B100,B102,B104,B107,B11,B110,B111,B112,B113,B114,B117,B122,B126,B129,B13,B131,B133,B135,B137,B139,B140,B2,B20,B21,B22,B23,B24,B27,B28,B3,B32,B35,B36,B40,B42,B43,B45,B46,B53,B59,B6,B64,B65,B70,B71,B73,B76,B77,B78,B79,B80,B84,B86,B88,B89,B9,B91,B93,B94,B99,C1,C11,C12,C14,C15,C17,C2,C20,C21,C26,C28,C29,C3,C31,C32,C34,C35,C36,C38,C39,C40,C42,C43,C44,C46,C48,C49,C5,C50,C52,C53,C55,C56,C6,C60,C62,C63,C64,C65,C66,C68,C69,C7,C71,C72,C75,C77,C79,C8,C80,C81,C82,C84,D1,D2,D3,D5

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057792719.1

408 aa

204

408

Abhydro_lipase

Abhydrolase_1

PF04083 Abhydro_lipase 45-104 aa PF00561 Abhydrolase_1 88-216 aa

XP_057792720.1

371 aa

186

371

Abhydro_lipase

PF04083 Abhydro_lipase 45-104 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057792719.1`	Pfam	`PF04083`	Abhydro_lipase	Family	45	104	2.1e-21	76.0	Partial alpha/beta-hydrolase lipase region
`XP_057792719.1`	Pfam	`PF00561`	Abhydrolase_1	Domain	88	216	6.6e-13	49.6	alpha/beta hydrolase fold
`XP_057792720.1`	Pfam	`PF04083`	Abhydro_lipase	Family	45	104	1.9e-21	76.1	Partial alpha/beta-hydrolase lipase region

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057936737.1
GGTAAATCACAAAAAAAATTGCAAGAGAAAAAAAATAAGAAGAAGCTGATATTTTAGTGTGACAAAAAATGGGGGCGGCGGCGGCGACGACGACGACATCCTTAATTTTGTTGCTACTTATGTTTGCTGTCTTAGCAGCTGGTGGAAGAACAAAGATTTCAAGAGAATTGGAATCCAATAATAATGGAGATGGATTGTGTAAGCAAATTGTGGAGACTCAAGGATATAGCTGTGAAGAACATAGGGTGACAACCAAAGAT...

XM_057936736.1
GTAAATCACAAAAAAAATTGCAAGAGAAAAAAAATAAGAAGAAGCTGATATTTTAGTGTGACAAAAAATGGGGGCGGCGGCGGCGACGACGACGACATCCTTAATTTTGTTGCTACTTATGTTTGCTGTCTTAGCAGCTGGTGGAAGAACAAAGATTTCAAGAGAATTGGAATCCAATAATAATGGAGATGGATTGTGTAAGCAAATTGTGGAGACTCAAGGATATAGCTGTGAAGAACATAGGGTGACAACCAAAGATG...

CDS

2 records

下载 CDS FASTA

LOC131009420
ATGGGGGCGGCGGCGGCGACGACGACGACATCCTTAATTTTGTTGCTACTTATGTTTGCTGTCTTAGCAGCTGGTGGAAGAACAAAGATTTCAAGAGAATTGGAATCCAATAATAATGGAGATGGATTGTGTAAGCAAATTGTGGAGACTCAAGGATATAGCTGTGAAGAACATAGGGTGACAACCAAAGATGGATACATCCTTAGCATGCAAAGGATTCCGACGGGGCGATCGGGCGCAACGACAAAGGAGCGGCCGAA...

Protein

2 records

下载 Protein FASTA

XP_057792719.1
MGAAAATTTTSLILLLLMFAVLAAGGRTKISRELESNNNGDGLCKQIVETQGYSCEEHRVTTKDGYILSMQRIPTGRSGATTKERPKPPVLLQHGILSDATIWLDMPCDKALGFILADNGFDVWLANVRATAYSSRHTSLSFNDSEYWEWSWDELAAYDFPATVEHVYNQTRQKLHYVGHSLGTLMAFAAFSRHKVFDMVRSAALLSPIAYMGQLPSPVSRIGAELFLGEAFYWLGIRKIAPEEDRGPPSKLLVDICKQI...

XP_057792720.1
MGAAAATTTTSLILLLLMFAVLAAGGRTKISRELESNNNGDGLCKQIVETQGYSCEEHRVTTKDGYILSMQRIPTGRSGATTKERPKPPVLLQHGILSDATIWLDMPCDKALGFILADNGFDVWLANVRATAYSSRHTSLSFNDSGTLMAFAAFSRHKVFDMVRSAALLSPIAYMGQLPSPVSRIGAELFLGEAFYWLGIRKIAPEEDRGPPSKLLVDICKQINCSNLVDLTSLSSGPNCCMNSSRSHLNRQQPTSTKNL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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