当前解析结果
SmilChr03G000182| 统一新 Gene ID | SmilChr03G000182 |
|---|---|
| 名称 | SmilChr03G000182 |
| 描述 | uncharacterized SmilChr03G000182 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 1945526 - 1946420 / + |
| NCBI Gene ID | LOC131016959 |
|---|---|
| GeneID | 131016959 |
| locus_tag | - |
| NCBI Name | LOC131016959 |
| 原始查询 | SmilChr03G000182 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831485]; symbol=AT5G16250; hit=AT5G16250; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831485]; symbol=AT5G16250; hit=AT5G16250; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G16250 (AT5G16250)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831485] identity=65.1; qcov=1; evalue=3.56e-76; confidence=high |
| Rice | Os04g0496300- identity=55.9; qcov=1.03; evalue=9.08e-61; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016959 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Vacuole | 液泡 | 0.80000 | XP_057801785.1 |
| 2 | Vacuole membrane | 液泡膜 | 0.80000 | XP_057801785.1 |
| 3 | Golgi apparatus | 高尔基体 | 0.40000 | XP_057801785.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057801785.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057801785.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:1945734 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B89,B92 |
Chr3:1945866 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A23,C16 |
Chr3:1945890 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B58 |
Chr3:1945905 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr3:1945918 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B41,B54,C69 |
Chr3:1945929 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr3:1946070 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B113 |
Chr3:1946096 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B118 |
Chr3:1946096 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B118 |
Chr3:1946109 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A18,B117,B33,B78 |
Chr3:1946123 |
TG |
T |
1bp_deletion | frameshift_variant | 1 | B133 |
Chr3:1946123 |
TG |
T |
1bp_deletion | CDS_variant | 1 | B133 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。