当前解析结果
SmilChr03G000555| 统一新 Gene ID | SmilChr03G000555 |
|---|---|
| 名称 | SmilChr03G000555 |
| 描述 | uncharacterized SmilChr03G000555 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 6006474 - 6010016 / - |
| NCBI Gene ID | LOC131017208 |
|---|---|
| GeneID | 131017208 |
| locus_tag | - |
| NCBI Name | LOC131017208 |
| 原始查询 | SmilChr03G000555 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819586]; symbol=AT3G04310; hit=AT3G04310; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819586]; symbol=AT3G04310; hit=AT3G04310; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G04310 (AT3G04310)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819586] identity=34.1; qcov=0.885; evalue=2.76e-28; confidence=low |
| Rice | Os01g0680600- identity=24.6; qcov=0.729; evalue=3.12e-12; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131017208 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057801927.1 |
| 2 | Chloroplast membrane | 叶绿体膜 | 1.00000 | XP_057801927.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057801927.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057801927.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057801927.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:6008296 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A20,D3 |
Chr3:6008392 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A19,B101,B104,B121,B66 |
Chr3:6008443 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A5,B11,B19 |
Chr3:6008562 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B20,B98 |
Chr3:6008616 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B20,B98 |
Chr3:6008668 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr3:6008676 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B24 |
Chr3:6008780 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C80 |
Chr3:6009571 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B25,B72,C25,C40,D8 |
Chr3:6009591 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B77,B9,C22,C26,C43 |
Chr3:6009617 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C60 |
Chr3:6009652 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。