当前解析结果
SmilChr03G000674| 统一新 Gene ID | SmilChr03G000674 |
|---|---|
| 名称 | SmilChr03G000674 |
| 描述 | interactor of constitutive active ROPs 2, chloroplastic-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 7540437 - 7542267 / - |
| NCBI Gene ID | LOC131018241 |
|---|---|
| GeneID | 131018241 |
| locus_tag | - |
| NCBI Name | LOC131018241 |
| 原始查询 | SmilChr03G000674 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | interactor of constitutive active ROPs 2, chloroplastic-like |
| 产物 | interactor of constitutive active ROPs 2%2C chloroplastic-like |
| Arabidopsis | AT2G37080 (RIP2)ROP interactive partner 3 [Source:NCBI gene (formerly Entrezgene);Acc:818284] identity=40; qcov=0.774; evalue=2.07e-26; confidence=medium |
| Rice | Os05g0122600- identity=37.6; qcov=0.802; evalue=6.76e-21; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018241 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057802948.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057802948.1 |
| 3 | Cell membrane | 细胞膜 | 0.20000 | XP_057802948.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057802948.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057802948.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:7540453 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A18,C45,C85 |
Chr3:7540485 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B33 |
Chr3:7540495 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B22 |
Chr3:7540540 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B10,B137 |
Chr3:7540590 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B29,D8 |
Chr3:7540600 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A5 |
Chr3:7540647 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
Chr3:7540650 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A20,B19 |
Chr3:7540653 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C5 |
Chr3:7540687 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A7,B115,B65,C16 |
Chr3:7540717 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B16,B50,B57,B82,B96 |
Chr3:7540718 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A6,C29,C50 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。