当前解析结果
SmilChr03G000983| 统一新 Gene ID | SmilChr03G000983 |
|---|---|
| 名称 | SmilChr03G000983 |
| 描述 | glutathione S-transferase T3-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 11147042 - 11148049 / + |
| NCBI Gene ID | LOC131018320 |
|---|---|
| GeneID | 131018320 |
| locus_tag | - |
| NCBI Name | LOC131018320 |
| 原始查询 | SmilChr03G000983 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glutathione S-transferase T3-like |
| 产物 | glutathione S-transferase T3-like |
| Arabidopsis | AT3G47680 (AT3G47680)DNA binding protein [Source:NCBI gene (formerly Entrezgene);Acc:823922] identity=32.7; qcov=0.484; evalue=6.81e-15; confidence=low |
| Rice | Os11g0303800- identity=23.1; qcov=0.839; evalue=1.47e-12; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018320 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803027.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057803027.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057803027.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057803027.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057803027.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:11147125 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr3:11147189 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A19 |
Chr3:11147228 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B17,C45 |
Chr3:11147255 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B112 |
Chr3:11147278 |
G |
A |
EMS_canonical_SNV | stop_gained | 2 | B45,D10 |
Chr3:11147278 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B45,D10 |
Chr3:11147334 |
G |
A |
EMS_canonical_SNV | stop_gained | 9 | B114,B127,B55,B58,B73,C30,C5,C61,C79 |
Chr3:11147367 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B14,B39,B84 |
Chr3:11147395 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D3 |
Chr3:11147442 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B20,B75,B93,C53,D10 |
Chr3:11147457 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B52 |
Chr3:11147457 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B52 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。