当前解析结果
SmilChr03G001113| 统一新 Gene ID | SmilChr03G001113 |
|---|---|
| 名称 | SmilChr03G001113 |
| 描述 | glycine-rich cell wall structural protein-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 12833052 - 12834839 / + |
| NCBI Gene ID | LOC131018357 |
|---|---|
| GeneID | 131018357 |
| locus_tag | - |
| NCBI Name | LOC131018357 |
| 原始查询 | SmilChr03G001113 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glycine-rich cell wall structural protein-like |
| 产物 | glycine-rich cell wall structural protein-like |
| Arabidopsis | AT3G22125 (AT3G22125)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:28719301] identity=44; qcov=1.1; evalue=5.08e-38; confidence=medium |
| Rice | Os03g0601000- identity=24.2; qcov=0.368; evalue=2.69e-08; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018357 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Secreted | 分泌到胞外 | 0.80000 | XP_057803070.1 |
| 2 | Vacuole | 液泡 | 0.20000 | XP_057803070.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057803070.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057803070.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057803070.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:12833136 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B53 |
Chr3:12833146 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B33,B37,C38 |
Chr3:12833162 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B56 |
Chr3:12833205 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B136,B31,C48 |
Chr3:12833207 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A1,B27 |
Chr3:12833221 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A9 |
Chr3:12833225 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A5,B120,B62,C57 |
Chr3:12833339 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C55,C74 |
Chr3:12833426 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A4,A9,B136,B38,C37 |
Chr3:12833431 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C35,C70 |
Chr3:12833435 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C2 |
Chr3:12833441 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A14,B137,B27,C28 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。