当前解析结果
SmilChr03G001144| 统一新 Gene ID | SmilChr03G001144 |
|---|---|
| 名称 | SmilChr03G001144 |
| 描述 | vegetative cell wall protein gp1-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 13198531 - 13199340 / + |
| NCBI Gene ID | LOC131018369 |
|---|---|
| GeneID | 131018369 |
| locus_tag | - |
| NCBI Name | LOC131018369 |
| 原始查询 | SmilChr03G001144 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | vegetative cell wall protein gp1-like |
| 产物 | vegetative cell wall protein gp1-like |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018369 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803081.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057803081.1 |
| 3 | Nucleoplasm | 核质 | 0.20000 | XP_057803081.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057803081.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057803081.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:13198538 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr3:13198580 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B111 |
Chr3:13198584 |
CT |
C |
1bp_deletion | frameshift_variant | 6 | A14,B3,B35,B37,B77,C41 |
Chr3:13198607 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D8 |
Chr3:13198617 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B88,D1 |
Chr3:13198618 |
GCA |
G |
2bp_deletion | frameshift_variant | 19 | A19,A6,B112,B133,B14,B29,B36,B64,B73,B76,B83,B84,B95,C32,C43,C59,C68,C80,C84 |
Chr3:13198648 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr3:13198659 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B88 |
Chr3:13198669 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C67 |
Chr3:13198693 |
GT |
G |
1bp_deletion | frameshift_variant | 10 | A15,B12,B131,B21,B24,B26,B40,B78,C28,C58 |
Chr3:13198695 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C67 |
Chr3:13198697 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B107,B35,B77,B83,B88 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。