当前解析结果
SmilChr03G001415| 统一新 Gene ID | SmilChr03G001415 |
|---|---|
| 名称 | SmilChr03G001415 |
| 描述 | uncharacterized SmilChr03G001415 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 16797549 - 16798387 / - |
| NCBI Gene ID | LOC131017889 |
|---|---|
| GeneID | 131017889 |
| locus_tag | - |
| NCBI Name | LOC131017889 |
| 原始查询 | SmilChr03G001415 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Avr9/Cf-9 rapidly elicited protein [Source:NCBI gene (formerly Entrezgene);Acc:834186]; symbol=AT5G41810; hit=AT5G41810; species=arabidopsis; confidence=low |
| 产物 | Avr9/Cf-9 rapidly elicited protein [Source:NCBI gene (formerly Entrezgene);Acc:834186]; symbol=AT5G41810; hit=AT5G41810; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G41810 (AT5G41810)Avr9/Cf-9 rapidly elicited protein [Source:NCBI gene (formerly Entrezgene);Acc:834186] identity=34.8; qcov=1.24; evalue=8.76e-26; confidence=low |
| Rice | Os06g0525200- identity=59; qcov=0.264; evalue=3.92e-10; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131017889 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057802609.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057802609.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057802609.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057802609.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057802609.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:16797961 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B100,B52,C32,C68 |
Chr3:16798108 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B117 |
Chr3:16798148 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C68 |
Chr3:16798230 |
AT |
A |
1bp_deletion | frameshift_variant | 20 | A1,A16,A21,B129,B132,B134,B136,B137,B26,B39,B66,B70,B8,B85,B98,C14,C15,C37,C50,D9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。