当前解析结果
SmilChr03G001503| 统一新 Gene ID | SmilChr03G001503 |
|---|---|
| 名称 | SmilChr03G001503 |
| 描述 | uncharacterized protein At5g41620 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 18383325 - 18387316 / - |
| NCBI Gene ID | LOC131017969 |
|---|---|
| GeneID | 131017969 |
| locus_tag | - |
| NCBI Name | LOC131017969 |
| 原始查询 | SmilChr03G001503 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | intracellular protein transporter USO1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834164]; symbol=AT5G41620; hit=AT5G41620; species=arabidopsis; confidence=medium |
| 产物 | intracellular protein transporter USO1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834164]; symbol=AT5G41620; hit=AT5G41620; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G41620 (AT5G41620)intracellular protein transporter USO1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834164] identity=45; qcov=0.914; evalue=4.6e-144; confidence=medium |
| Rice | Os02g0260500 (SIP7)- identity=36; qcov=0.768; evalue=1.48e-79; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131017969 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057802714.1 |
| 2 | Cytoskeleton | 细胞骨架 | 0.80000 | XP_057802714.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057802714.1 |
| 4 | Nucleus membrane | 核膜 | 0.20000 | XP_057802714.1 |
| 5 | Cytosol | 细胞质基质 | 0.20000 | XP_057802714.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:18383674 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B73 |
Chr3:18383706 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr3:18383744 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B12,B13,C58,D11 |
Chr3:18383942 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A21,A7,B66,B80 |
Chr3:18383944 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr3:18384035 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A20,C32,C68,D3 |
Chr3:18384078 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A21,B66 |
Chr3:18384191 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B13,C58 |
Chr3:18384220 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C65 |
Chr3:18384288 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
Chr3:18384329 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr3:18384356 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。