当前解析结果
SmilChr03G001581| 统一新 Gene ID | SmilChr03G001581 |
|---|---|
| 名称 | SmilChr03G001581 |
| 描述 | late embryogenesis abundant protein At1g64065-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 19967704 - 19968601 / - |
| NCBI Gene ID | LOC131018038 |
|---|---|
| GeneID | 131018038 |
| locus_tag | - |
| NCBI Name | LOC131018038 |
| 原始查询 | SmilChr03G001581 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | late embryogenesis abundant protein At1g64065-like |
| 产物 | late embryogenesis abundant protein At1g64065-like |
| Arabidopsis | AT1G64065 (AT1G64065)Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:NCBI gene (formerly Entrezgene);Acc:2745848] identity=31.2; qcov=0.931; evalue=8.69e-24; confidence=low |
| Rice | Os06g0521300- identity=25.1; qcov=0.882; evalue=6.58e-12; confidence=low |
| GO | GO:0005886 (plasma membrane) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018038 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057802763.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057802763.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057802763.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057802763.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057802763.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:19967766 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A6,C60,D11 |
Chr3:19967940 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A8,B72 |
Chr3:19967951 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A14,A24,B46,B50,D3 |
Chr3:19967976 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B100 |
Chr3:19968038 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C58 |
Chr3:19968083 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A7,B80,D11 |
Chr3:19968125 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B133,B90,B92 |
Chr3:19968153 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B113,B117,C37 |
Chr3:19968172 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B80 |
Chr3:19968255 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A16,B128,B136,B26,B45 |
Chr3:19968276 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A7,B80 |
Chr3:19968281 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A14,A24,B46,B50,D3 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。