当前解析结果
SmilChr03G001680| 统一新 Gene ID | SmilChr03G001680 |
|---|---|
| 名称 | SmilChr03G001680 |
| 描述 | uncharacterized SmilChr03G001680 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 22076687 - 22082361 / - |
| NCBI Gene ID | LOC131015615 |
|---|---|
| GeneID | 131015615 |
| locus_tag | - |
| NCBI Name | LOC131015615 |
| 原始查询 | SmilChr03G001680 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os03g0123600; species=rice; confidence=high |
| 产物 | hit=Os03g0123600; species=rice; confidence=high |
| Arabidopsis | AT1G63830 (AT1G63830)PLAC8 family protein [Source:NCBI gene (formerly Entrezgene);Acc:842686] identity=77.3; qcov=0.976; evalue=1.25e-134; confidence=high |
| Rice | Os03g0123600- identity=83.1; qcov=0.98; evalue=9.32e-143; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015615 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057800039.1 |
| 2 | Vesicle | 囊泡 | 0.80000 | XP_057800039.1 |
| 3 | Cytoplasmic vesicle | 细胞质囊泡 | 0.40000 | XP_057800039.1 |
| 4 | Cell projection | 细胞突起 | 0.40000 | XP_057800039.1 |
| 5 | Endosome | 内体 | 0.40000 | XP_057800039.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:22077531 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C10 |
Chr3:22077563 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr3:22077602 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr3:22079832 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B127 |
Chr3:22081586 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B75 |
Chr3:22081586 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr3:22081597 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C9 |
Chr3:22081828 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A18 |
Chr3:22081839 |
A |
ATC |
2bp_insertion | frameshift_variant | 16 | A11,A2,B130,B76,B78,B93,C18,C19,C2,C61,C64,C65,C66,C83,D10,D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。