当前解析结果
SmilChr03G001768| 统一新 Gene ID | SmilChr03G001768 |
|---|---|
| 名称 | SmilChr03G001768 |
| 描述 | glutathione S-transferase T3-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 24161474 - 24163357 / + |
| NCBI Gene ID | LOC131018555 |
|---|---|
| GeneID | 131018555 |
| locus_tag | - |
| NCBI Name | LOC131018555 |
| 原始查询 | SmilChr03G001768 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glutathione S-transferase T3-like |
| 产物 | glutathione S-transferase T3-like |
| Arabidopsis | AT5G41220 (GSTT3)glutathione S-transferase THETA 3 [Source:NCBI gene (formerly Entrezgene);Acc:834124] identity=25.8; qcov=0.566; evalue=1.49e-12; confidence=low |
| Rice | Os11g0303800- identity=23.8; qcov=1.01; evalue=1.23e-16; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018555 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803253.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057803253.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057803253.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057803253.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057803253.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:24161477 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A8,B14,B77 |
Chr3:24161518 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B51 |
Chr3:24161582 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C49 |
Chr3:24161590 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C49 |
Chr3:24161618 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C8 |
Chr3:24161644 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B14,B67,C1,C2,C77 |
Chr3:24161657 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B125 |
Chr3:24161658 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr3:24161661 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A10,B68,D1 |
Chr3:24161670 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr3:24161671 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B93,C2 |
Chr3:24161683 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B125 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。