当前解析结果
SmilChr03G001886| 统一新 Gene ID | SmilChr03G001886 |
|---|---|
| 名称 | SmilChr03G001886 |
| 描述 | ABC transporter C family member 8-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 26266367 - 26267052 / + |
| NCBI Gene ID | LOC131018592 |
|---|---|
| GeneID | 131018592 |
| locus_tag | - |
| NCBI Name | LOC131018592 |
| 原始查询 | SmilChr03G001886 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | ABC transporter C family member 8-like |
| 产物 | ABC transporter C family member 8-like |
| Arabidopsis | AT3G21250 (ABCC8)multidrug resistance-associated protein 6 [Source:NCBI gene (formerly Entrezgene);Acc:821679] identity=82; qcov=1; evalue=5.9e-63; confidence=high |
| Rice | Os05g0196100 (OsABCC14)- identity=73.5; qcov=1; evalue=9.78e-59; confidence=high |
| GO | GO:0000325 (plant-type vacuole); GO:0005524 (ATP binding); GO:0005774 (vacuolar membrane); GO:0016887 (ATP hydrolysis activity); GO:0042626 (ATPase-coupled transmembrane transporter activity); GO:0055085 (transmembrane transport) |
| KEGG | - |
| Pfam | PF00005 (ABC_tran) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018592 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057803288.1 |
| 2 | Cytosol | 细胞质基质 | 0.20000 | XP_057803288.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057803288.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057803288.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057803288.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057803288.1PF00005
ABC_tran 2-94 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057803288.1 |
Pfam | PF00005 |
ABC_tran | Domain | 2 | 94 | 4.5e-16 | 60.4 | ABC transporter |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。