当前解析结果
SmilChr03G001958| 统一新 Gene ID | SmilChr03G001958 |
|---|---|
| 名称 | SmilChr03G001958 |
| 描述 | uncharacterized SmilChr03G001958 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 27992014 - 27993234 / - |
| NCBI Gene ID | LOC131018615 |
|---|---|
| GeneID | 131018615 |
| locus_tag | - |
| NCBI Name | LOC131018615 |
| 原始查询 | SmilChr03G001958 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | confidence=no_hit |
| 产物 | confidence=no_hit |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018615 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057803312.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057803312.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057803312.1 |
| 4 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057803312.1 |
| 5 | Cytosol | 细胞质基质 | 0.20000 | XP_057803312.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:27992056 |
T |
TA |
1bp_insertion | frameshift_variant | 1 | B95 |
Chr3:27992056 |
T |
TA |
1bp_insertion | CDS_variant | 1 | B95 |
Chr3:27992064 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B19 |
Chr3:27992070 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B95 |
Chr3:27992081 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A18,C23 |
Chr3:27992116 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B52,B75,B9 |
Chr3:27992182 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B104,B137,B16,B2,C19 |
Chr3:27992192 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B136,C57 |
Chr3:27992250 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B136,C57 |
Chr3:27992255 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
Chr3:27992292 |
G |
A |
EMS_canonical_SNV | stop_gained | 2 | B136,C57 |
Chr3:27992292 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B136,C57 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。