当前解析结果
SmilChr03G002125| 统一新 Gene ID | SmilChr03G002125 |
|---|---|
| 名称 | SmilChr03G002125 |
| 描述 | uncharacterized SmilChr03G002125 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 33052116 - 33055705 / - |
| NCBI Gene ID | LOC131018672 |
|---|---|
| GeneID | 131018672 |
| locus_tag | - |
| NCBI Name | LOC131018672 |
| 原始查询 | SmilChr03G002125 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | confidence=no_hit |
| 产物 | confidence=no_hit |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018672 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057803369.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057803369.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057803369.1 |
| 4 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057803369.1 |
| 5 | P-body | P-body | 0.20000 | XP_057803369.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:33052123 |
TTC |
T |
2bp_deletion | frameshift_variant | 2 | B138,C14 |
Chr3:33052123 |
TTC |
T |
2bp_deletion | CDS_variant | 2 | B138,C14 |
Chr3:33052136 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B101,B113,C29,D5 |
Chr3:33052140 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A18,B1,B24 |
Chr3:33052156 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B83,C59 |
Chr3:33052157 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B15,B57,C63,C69 |
Chr3:33052171 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B125,B96 |
Chr3:33052176 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B49,B75,B81,C20,C48 |
Chr3:33052180 |
T |
TA |
1bp_insertion | frameshift_variant | 1 | C48 |
Chr3:33052180 |
T |
TA |
1bp_insertion | CDS_variant | 1 | C48 |
Chr3:33052185 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A21 |
Chr3:33052196 |
G |
A |
EMS_canonical_SNV | stop_gained | 5 | A25,B113,B126,C44,C45 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。