当前解析结果
SmilChr03G002281| 统一新 Gene ID | SmilChr03G002281 |
|---|---|
| 名称 | SmilChr03G002281 |
| 描述 | uncharacterized SmilChr03G002281 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 35996670 - 35998013 / - |
| NCBI Gene ID | LOC131018722 |
|---|---|
| GeneID | 131018722 |
| locus_tag | - |
| NCBI Name | LOC131018722 |
| 原始查询 | SmilChr03G002281 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | confidence=no_hit |
| 产物 | confidence=no_hit |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018722 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057803413.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057803413.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057803413.1 |
| 4 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057803413.1 |
| 5 | Cytosol | 细胞质基质 | 0.20000 | XP_057803413.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:35996696 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B104,B126,B33,C12,D6 |
Chr3:35996710 |
G |
GA |
1bp_insertion | frameshift_variant | 116 | A14,A16,A18,A19,A20,A23,A25,A8,B10,B100,B103,B105,B107,B109,B11,B12,B121,B122,B124,B125,B126,B128,B130,B133,B134,B137,B139,B14,B140,B17,B20,B21,B23,B25,B26,B27,B29,B31,B33,B34,B35,B36,B4,B41,B42,B43,B46,B47,B48,B52,B56,B58,B59,B6,B64,B65,B69,B70,B72,B76,B79,B82,B83,B84,B87,B90,B91,B95,B96,C1,C12,C16,C18,C2,C20,C25,C27,C28,C29,C3,C31,C32,C34,C38,C39,C4,C41,C42,C43,C44,C45,C5,C50,C51,C55,C60,C62,C63,C67,C69,C70,C72,C73,C74,C79,C8,C81,C82,C85,C86,D2,D3,D4,D5,D6,D9 |
Chr3:35996712 |
A |
AG |
1bp_insertion | frameshift_variant | 133 | A1,A14,A16,A21,A24,A25,A4,A5,A7,A8,B10,B100,B108,B111,B112,B113,B120,B126,B129,B131,B136,B138,B139,B14,B140,B16,B17,B18,B19,B2,B20,B22,B23,B24,B26,B28,B3,B32,B33,B35,B36,B37,B38,B39,B4,B41,B42,B43,B45,B46,B47,B50,B51,B57,B6,B62,B66,B68,B69,B7,B71,B72,B73,B74,B76,B77,B78,B80,B81,B83,B86,B89,B93,B94,B98,B99,C1,C10,C11,C16,C17,C19,C22,C23,C25,C26,C29,C3,C31,C32,C34,C35,C36,C37,C38,C39,C41,C42,C46,C47,C5,C50,C51,C52,C54,C55,C56,C59,C6,C60,C61,C62,C63,C64,C67,C68,C69,C71,C72,C74,C75,C76,C77,C78,C79,C8,C85,C86,C87,D1,D3,D4,D8 |
Chr3:35996713 |
G |
GA |
1bp_insertion | frameshift_variant | 5 | B43,B61,B8,B80,C58 |
Chr3:35996713 |
G |
GA |
1bp_insertion | CDS_variant | 5 | B43,B61,B8,B80,C58 |
Chr3:35996714 |
G |
GA |
1bp_insertion | frameshift_variant | 3 | B41,B71,C70 |
Chr3:35996714 |
G |
GA |
1bp_insertion | CDS_variant | 3 | B41,B71,C70 |
Chr3:35996715 |
G |
GA |
1bp_insertion | frameshift_variant | 57 | A16,A20,A22,A5,A6,A8,B102,B103,B104,B105,B112,B114,B126,B128,B140,B16,B18,B2,B20,B22,B23,B29,B33,B38,B39,B41,B50,B59,B60,B65,B70,B75,B81,B85,B91,B97,C11,C12,C15,C27,C31,C33,C44,C49,C50,C54,C55,C58,C61,C68,C75,C80,C85,D11,D4,D6,D9 |
Chr3:35996719 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B122,B134,C41 |
Chr3:35996730 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B102,C44,D11 |
Chr3:35996744 |
CT |
C |
1bp_deletion | frameshift_variant | 4 | A5,B101,C83,D4 |
Chr3:35996744 |
CT |
C |
1bp_deletion | CDS_variant | 4 | A5,B101,C83,D4 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。