Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G002350`

染色体: Chr03 坐标: 37133132-37137085 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G002350`
名称	SmilChr03G002350
描述	protein N-terminal and lysine N-methyltransferase EFM7
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	37133132 - 37137085 / `+`

ID 对照

NCBI Gene ID	`LOC131016548`
GeneID	`131016548`
locus_tag	`-`
NCBI Name	`LOC131016548`
原始查询	`SmilChr03G002350`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	protein N-terminal and lysine N-methyltransferase EFM7
产物	protein N-terminal and lysine N-methyltransferase EFM7
Arabidopsis	`AT5G01470` (AT5G01470) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831788] identity=69.3; qcov=0.984; evalue=1.49e-122; confidence=high
Rice	`Os03g0826700` - identity=58.9; qcov=1; evalue=8.64e-99; confidence=high
GO	-
KEGG	-
Pfam	PF10294 (Methyltransf_16); PF13489 (Methyltransf_23)
InterPro	-
eggNOG	-
NR	GeneID:131016548

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057801251.1`
2	Cytoplasm	细胞质	0.80000	`XP_057801251.1`
3	Nucleus	细胞核	0.60000	`XP_057801252.1`
4	Chromosome	染色体	0.00000	`XP_057801251.1`
5	Centromere	着丝粒	0.00000	`XP_057801251.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:37133274`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B100,B119,B34
`Chr3:37136123`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B11
`Chr3:37136553`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B11
`Chr3:37136596`	`TC`	`T`	1bp_deletion	frameshift_variant	1	B37
`Chr3:37136596`	`TC`	`T`	1bp_deletion	CDS_variant	1	B37
`Chr3:37136645`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A1,B129,B132,B2,C12
`Chr3:37136690`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B80
`Chr3:37136724`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B48,D4
`Chr3:37136751`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C1
`Chr3:37136806`	`TC`	`T`	1bp_deletion	frameshift_variant	42	A18,B10,B108,B111,B113,B120,B125,B130,B139,B26,B28,B3,B30,B33,B37,B4,B47,B50,B51,B59,B60,B7,B76,B9,B93,B97,C13,C14,C15,C19,C20,C22,C23,C32,C38,C41,C56,C68,C76,C78,C83,D3

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057801251.1

252 aa

126

252

Methyltransf_16

Methyltransf_23

PF10294 Methyltransf_16 56-177 aa PF13489 Methyltransf_23 78-176 aa

XP_057801252.1

248 aa

124

248

Methyltransf_16

Methyltransf_23

PF10294 Methyltransf_16 56-178 aa PF13489 Methyltransf_23 78-176 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057801251.1`	Pfam	`PF10294`	Methyltransf_16	Family	56	177	3.9e-13	50.2	Lysine methyltransferase
`XP_057801251.1`	Pfam	`PF13489`	Methyltransf_23	Domain	78	176	2.2e-06	28.2	Methyltransferase domain
`XP_057801252.1`	Pfam	`PF10294`	Methyltransf_16	Family	56	178	1.9e-13	51.3	Lysine methyltransferase
`XP_057801252.1`	Pfam	`PF13489`	Methyltransf_23	Domain	78	176	1.9e-06	28.4	Methyltransferase domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057945268.1
CCAGTTTCATTTAACAGCAAATACTATTAAATTAAATTTATGTGAAATTTTGAGCCCAATCCGAAAAATTACACCGTAGCAGAATCAGAATGGACATCGCCCTTTTCTCTCCTTCTTCCCTTTTCGCCGGCGGCTCCGACGGCAGTTCCTCCGAAGAGGAAAGGAGTGAAACCCACGAGAATTTTGTAGAGCGAAAACACCAATTTCCTGGAATGGAATTACTTGTCCGAGAGTTTTCTTTCCATCAATTGAATGCTAAT...

XM_057945269.1
GTTTCATTTAACAGCAAATACTATTAAATTAAATTTATGTGAAATTTTGAGCCCAATCCGAAAAATTACACCGTAGCAGAATCAGAATGGACATCGCCCTTTTCTCTCCTTCTTCCCTTTTCGCCGGCGGCTCCGACGGCAGTTCCTCCGAAGAGGAAAGGAGTGAAACCCACGAGAATTTTGTAGAGCGAAAACACCAATTTCCTGGAATGGAATTACTTGTCCGAGAGTTTTCTTTCCATCAATTGAATGCTAATCTA...

CDS

2 records

下载 CDS FASTA

LOC131016548
ATGGACATCGCCCTTTTCTCTCCTTCTTCCCTTTTCGCCGGCGGCTCCGACGGCAGTTCCTCCGAAGAGGAAAGGAGTGAAACCCACGAGAATTTTGTAGAGCGAAAACACCAATTTCCTGGAATGGAATTACTTGTCCGAGAGTTTTCTTTCCATCAATTGAATGCTAATCTACTGTGGCCTGGCACATTTGCATTTGCTGAATGGTTGGTCGAGCACAAGCAATGGTTGGAGGGTAGGAGAGTGCTTGAGCTGGGGAG...

Protein

2 records

下载 Protein FASTA

XP_057801251.1
MDIALFSPSSLFAGGSDGSSSEEERSETHENFVERKHQFPGMELLVREFSFHQLNANLLWPGTFAFAEWLVEHKQWLEGRRVLELGSGTGALAIFLRKAFEVDITTSDYDDVEIEENIAYNCLINGVTPVLPHLRHSWGDVFPNSNPDWDLIIASDILLYVKQYANLIKSLLFLLNSYKANEAVCWRNEANGIDALSLVYFSVIIDNEFTLPSAICFRFVPSYSTSVLDELETQDWERGRVSILYRLQRSWT

XP_057801252.1
MDIALFSPSSLFAGGSDGSSSEEERSETHENFVERKHQFPGMELLVREFSFHQLNANLLWPGTFAFAEWLVEHKQWLEGRRVLELGSGTGALAIFLRKAFEVDITTSDYDDVEIEENIAYNCLINGVTPVLPHLRHSWGDVFPNSNPDWDLIIASDILLYVKQYANLIKSLLFLLNSYKANEAVCWRNEANDSCPLTRPAFLMSWRRRIGKEEESLFFTGCKEAGLEVDHLGCRVYCIKRSTNASQSS

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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