当前解析结果
SmilChr03G002545| 统一新 Gene ID | SmilChr03G002545 |
|---|---|
| 名称 | SmilChr03G002545 |
| 描述 | uncharacterized SmilChr03G002545 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 40622830 - 40623603 / + |
| NCBI Gene ID | LOC131018804 |
|---|---|
| GeneID | 131018804 |
| locus_tag | - |
| NCBI Name | LOC131018804 |
| 原始查询 | SmilChr03G002545 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | OS-CAD; symbol=OS-CAD; hit=Os03g0581100; species=rice; confidence=low |
| 产物 | OS-CAD; symbol=OS-CAD; hit=Os03g0581100; species=rice; confidence=low |
| Arabidopsis | AT4G19990 (FRS1)FAR1-related sequence 1 [Source:NCBI gene (formerly Entrezgene);Acc:827744] identity=32.2; qcov=0.447; evalue=1.89e-14; confidence=low |
| Rice | Os03g0581100 (OS-CAD)- identity=30.4; qcov=0.755; evalue=6.07e-20; confidence=low |
| GO | GO:0006355 (regulation of DNA-templated transcription); GO:0008270 (zinc ion binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018804 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803496.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057803496.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057803496.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057803496.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057803496.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:40622832 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B124,B79,C43 |
Chr3:40622841 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B124,B79,C43 |
Chr3:40622843 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B103,B130,C52,D10 |
Chr3:40622890 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B103,B122 |
Chr3:40622891 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B97,C38,C73 |
Chr3:40622903 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B129 |
Chr3:40622904 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C47,C64,C66 |
Chr3:40623001 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C47 |
Chr3:40623040 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A8,B37,C30,C77,D1 |
Chr3:40623053 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B102,B22,B53,B58,C29 |
Chr3:40623059 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B52,B91,C62,D7 |
Chr3:40623065 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B101,B126,B33 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。