当前解析结果
SmilChr03G002581| 统一新 Gene ID | SmilChr03G002581 |
|---|---|
| 名称 | SmilChr03G002581 |
| 描述 | bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 41073099 - 41074555 / - |
| NCBI Gene ID | LOC131016738 |
|---|---|
| GeneID | 131016738 |
| locus_tag | - |
| NCBI Name | LOC131016738 |
| 原始查询 | SmilChr03G002581 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like |
| 产物 | bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like |
| Arabidopsis | AT2G33590 (CRL1)NAD(P)-binding Rossmann-fold superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817925] identity=59.1; qcov=0.921; evalue=1.14e-32; confidence=medium |
| Rice | Os06g0623300 (OsCCR8)- identity=47.5; qcov=1; evalue=1.56e-26; confidence=medium |
| GO | GO:0016616 (oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016738 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057801433.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057801433.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057801433.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057801433.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057801433.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:41073347 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A2,B104 |
Chr3:41073371 |
T |
TG |
1bp_insertion | frameshift_variant | 4 | A18,B5,B57,B94 |
Chr3:41073371 |
T |
TG |
1bp_insertion | CDS_variant | 4 | A18,B5,B57,B94 |
Chr3:41073378 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A2,B104,B107,C72 |
Chr3:41073379 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A2,B104,B107,C72 |
Chr3:41073408 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B107,C72 |
Chr3:41073444 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B106,B133,B138,B37 |
Chr3:41074207 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr3:41074213 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr3:41074229 |
G |
A |
EMS_canonical_SNV | stop_gained | 35 | A2,A24,B105,B109,B112,B113,B114,B115,B117,B12,B127,B137,B28,B31,B46,B55,B73,B82,B83,B9,B92,C19,C20,C27,C3,C47,C56,C59,C64,C66,C71,C78,C79,C9,D3 |
Chr3:41074320 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B69,C1 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。