Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G002582`

染色体: Chr03 坐标: 41084350-41090165 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G002582`
名称	SmilChr03G002582
描述	uncharacterized SmilChr03G002582
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	41084350 - 41090165 / `+`

ID 对照

NCBI Gene ID	`LOC131016739`
GeneID	`131016739`
locus_tag	`-`
NCBI Name	`LOC131016739`
原始查询	`SmilChr03G002582`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	phosphoinositide binding protein [Source:NCBI gene (formerly Entrezgene);Acc:842466]; symbol=AT1G61690; hit=AT1G61690; species=arabidopsis; confidence=medium
产物	phosphoinositide binding protein [Source:NCBI gene (formerly Entrezgene);Acc:842466]; symbol=AT1G61690; hit=AT1G61690; species=arabidopsis; confidence=medium
Arabidopsis	`AT1G61690` (AT1G61690) phosphoinositide binding protein [Source:NCBI gene (formerly Entrezgene);Acc:842466] identity=43.6; qcov=0.756; evalue=8.42e-142; confidence=medium
Rice	`Os03g0669800` - identity=46.8; qcov=0.653; evalue=9.12e-132; confidence=high
GO	GO:0005515 (protein binding); GO:0046872 (metal ion binding)
KEGG	-
Pfam	PF01363 (FYVE)
InterPro	-
eggNOG	-
NR	GeneID:131016739

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	0.80000	`XP_057801434.1`
2	Cytoplasm	细胞质	0.40000	`XP_057801434.1`
3	Phragmoplast	Phragmoplast	0.40000	`XP_057801434.1`
4	Nucleus	细胞核	0.20000	`XP_057801435.1`
5	Golgi apparatus	高尔基体	0.20000	`XP_057801435.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:41084610`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B132
`Chr3:41084625`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A21
`Chr3:41086005`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A2,B104,B107,C72
`Chr3:41087467`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr3:41087646`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C27
`Chr3:41087658`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B101,B132
`Chr3:41087761`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C10
`Chr3:41088326`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B101,B132
`Chr3:41088370`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr3:41088440`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B122
`Chr3:41088441`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B105,C34,C77
`Chr3:41088545`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B105,B33,C34

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057801434.1

987 aa

494

987

FYVE

PF01363 FYVE 21-75 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057801434.1`	Pfam	`PF01363`	FYVE	Domain	21	75	1.7e-17	64.0	FYVE zinc finger

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057945451.1
TTATTATCTTATTTGGTACATGAAAATACCAAAGTTTTCCCTCAGAAATAAGGAAAAGACTGAAACTCGGTATTCTCGACTCTTGATAGAGAGAGAGCCATCTTTCCTCAACGCTTTTGTTTCAATTCAATCTTTCGATTTTGATCACTACAGAAGCTCAAAGAAAGAACTAAGGTGGAAACAAAAAGAGAGAGAAGATGCTGGAGAAAATTGGGCTGCCTCCGAAGCCATCACTAAGAGGGAATACTTGGGTGGTTGAC...

XM_057945452.1
CACCATTGCCGCAGGTGTGGAGGCATATTTTGCGGCAGCTGTTCCCAGCAAAGAATGGTATTGCGTGGACAAGGTGACTCACCTGTGCGTATCTGTGAACCATGCAAAAAACTAGAAGAGGCGGCACGATTTGAAATGAGATATGGACATAAAAATAAATCTTCTAGAGGCTAAGCTATTTGCAGGTAGTTCCAAGAATGTTTCAAAGAAAGATGAAGAGATTTTGAATCAGACTCCTAGTAATGAGAATAGGCGTTCCT...

CDS

2 records

下载 CDS FASTA

LOC131016739
ATGCTGGAGAAAATTGGGCTGCCTCCGAAGCCATCACTAAGAGGGAATACTTGGGTGGTTGACGCCTCACATTGCCAAGGATGTTCCTCACAGTTCACTTTCATCAATCGCAAGCACCATTGCCGCAGGTGTGGAGGCATATTTTGCGGCAGCTGTTCCCAGCAAAGAATGGTATTGCGTGGACAAGGTGACTCACCTGTGCGTATCTGTGAACCATGCAAAAAACTAGAAGAGGCGGCACGATTTGAAATGAGATATGG...

LOC131016739
ATGGACATAAAAATAAATCTTCTAGAGGCTAAGCTATTTGCAGGTAGTTCCAAGAATGTTTCAAAGAAAGATGAAGAGATTTTGAATCAGACTCCTAGTAATGAGAATAGGCGTTCCTCTTCACAAAAGAACGATGCATCATGTTCAAACATTTCTGAAGTAGCTACTCAGGTTGAAGGTGCAGATATAGTTGGAAATCTCTCTCTTGATAAGTCTACCAACACATTGACAGAGGCAGGATCTGCTACCCCAGAAGATCT...

Protein

2 records

下载 Protein FASTA

XP_057801434.1
MLEKIGLPPKPSLRGNTWVVDASHCQGCSSQFTFINRKHHCRRCGGIFCGSCSQQRMVLRGQGDSPVRICEPCKKLEEAARFEMRYGHKNKSSRGSSKNVSKKDEEILNQTPSNENRRSSSQKNDASCSNISEVATQVEGADIVGNLSLDKSTNTLTEAGSATPEDLRQQALLEKQKHRTLKAEGKPEEALKAFKKGKELERQAAALELALRKNSKRALSSSNIDDIQENKDEAKASGPKNKLSSQKNKGTDDVSAELKE...

XP_057801435.1
MDIKINLLEAKLFAGSSKNVSKKDEEILNQTPSNENRRSSSQKNDASCSNISEVATQVEGADIVGNLSLDKSTNTLTEAGSATPEDLRQQALLEKQKHRTLKAEGKPEEALKAFKKGKELERQAAALELALRKNSKRALSSSNIDDIQENKDEAKASGPKNKLSSQKNKGTDDVSAELKELGWSDFDLHDAENKPATMSLEGELFSLLKEVSQKPDKEKQTVSADKSKVTAHKKRALELKRAGNVVEAKEELKRAKILER...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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