当前解析结果
SmilChr03G002644| 统一新 Gene ID | SmilChr03G002644 |
|---|---|
| 名称 | SmilChr03G002644 |
| 描述 | uncharacterized SmilChr03G002644 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 42061571 - 42063144 / - |
| NCBI Gene ID | LOC131015835 |
|---|---|
| GeneID | 131015835 |
| locus_tag | - |
| NCBI Name | LOC131015835 |
| 原始查询 | SmilChr03G002644 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819068]; symbol=AT2G44600; hit=AT2G44600; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819068]; symbol=AT2G44600; hit=AT2G44600; species=arabidopsis; confidence=medium |
| Arabidopsis | AT2G44600 (AT2G44600)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819068] identity=38.2; qcov=1.08; evalue=1.2e-42; confidence=medium |
| Rice | Os02g0689500- identity=33.3; qcov=1.05; evalue=4.89e-28; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015835 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057800255.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057800255.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057800255.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057800255.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057800255.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:42061852 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr3:42061862 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B1,D10 |
Chr3:42061936 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A4,B42,B43 |
Chr3:42061967 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C87 |
Chr3:42061994 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C14 |
Chr3:42062036 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B108,C23 |
Chr3:42062066 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B122,B59,D10 |
Chr3:42062099 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B108,C23 |
Chr3:42062119 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A4,B42,B43 |
Chr3:42062308 |
TG |
T |
1bp_deletion | frameshift_variant | 1 | A25 |
Chr3:42062308 |
TG |
T |
1bp_deletion | CDS_variant | 1 | A25 |
Chr3:42062309 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A2,C38 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。