当前解析结果
SmilChr03G002648| 统一新 Gene ID | SmilChr03G002648 |
|---|---|
| 名称 | SmilChr03G002648 |
| 描述 | uncharacterized SmilChr03G002648 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 42122791 - 42126446 / - |
| NCBI Gene ID | LOC131015837 |
|---|---|
| GeneID | 131015837 |
| locus_tag | - |
| NCBI Name | LOC131015837 |
| 原始查询 | SmilChr03G002648 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | beta-mannosyltransferase-like protein [Source:NCBI gene (formerly Entrezgene);Acc:816242]; symbol=AT2G17350; hit=AT2G17350; species=arabidopsis; confidence=high |
| 产物 | beta-mannosyltransferase-like protein [Source:NCBI gene (formerly Entrezgene);Acc:816242]; symbol=AT2G17350; hit=AT2G17350; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G17350 (AT2G17350)beta-mannosyltransferase-like protein [Source:NCBI gene (formerly Entrezgene);Acc:816242] identity=95.7; qcov=1; evalue=9.11e-66; confidence=high |
| Rice | Os09g0491692- identity=92.3; qcov=1; evalue=1.74e-65; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015837 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057800256.1 |
| 2 | Cytoskeleton | 细胞骨架 | 0.80000 | XP_057800256.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057800256.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057800256.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057800256.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:42123094 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B40,C33,C78 |
Chr3:42123124 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr3:42123147 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D4 |
Chr3:42123191 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B74,B77 |
Chr3:42124523 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C39 |
Chr3:42124528 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr3:42124652 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B77,C33,C78 |
Chr3:42124666 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B106,B139 |
Chr3:42124667 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。