当前解析结果
SmilChr03G002652| 统一新 Gene ID | SmilChr03G002652 |
|---|---|
| 名称 | SmilChr03G002652 |
| 描述 | uncharacterized SmilChr03G002652 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 42176152 - 42177479 / + |
| NCBI Gene ID | LOC131018826 |
|---|---|
| GeneID | 131018826 |
| locus_tag | - |
| NCBI Name | LOC131018826 |
| 原始查询 | SmilChr03G002652 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os08g0225900; species=rice; confidence=low |
| 产物 | hit=Os08g0225900; species=rice; confidence=low |
| Arabidopsis | AT1G66235 (AT1G66235)no-apical-meristem-associated carboxy-terminal domain protein [Source:NCBI gene (formerly Entrezgene);Acc:842939] identity=25.9; qcov=0.645; evalue=4.96e-11; confidence=low |
| Rice | Os08g0225900- identity=29.3; qcov=0.606; evalue=1.7e-12; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018826 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803514.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057803514.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057803514.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057803514.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057803514.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:42176170 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C83 |
Chr3:42176190 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B32,B50,B60 |
Chr3:42176195 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr3:42176198 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr3:42176204 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B128,B17 |
Chr3:42176228 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C83 |
Chr3:42176272 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B128,B17 |
Chr3:42176280 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B22 |
Chr3:42176283 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B78,B86 |
Chr3:42176290 |
C |
T |
EMS_canonical_SNV | stop_gained | 3 | B128,B53,C75 |
Chr3:42176290 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B128,B53,C75 |
Chr3:42176299 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B128,B53,C75 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。