当前解析结果
SmilChr03G002679| 统一新 Gene ID | SmilChr03G002679 |
|---|---|
| 名称 | SmilChr03G002679 |
| 描述 | ent-kaurenoic acid oxidase 1-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 42584714 - 42588608 / + |
| NCBI Gene ID | LOC131015858 |
|---|---|
| GeneID | 131015858 |
| locus_tag | - |
| NCBI Name | LOC131015858 |
| 原始查询 | SmilChr03G002679 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | ent-kaurenoic acid oxidase 1-like |
| 产物 | ent-kaurenoic acid oxidase 1-like |
| Arabidopsis | AT1G05160 (CYP88A3)cytochrome P450, family 88, subfamily A, polypeptide 3 [Source:NCBI gene (formerly Entrezgene);Acc:839311] identity=70.7; qcov=0.98; evalue=0; confidence=high |
| Rice | Os06g0110000 (OsKAO)- identity=57; qcov=0.959; evalue=0; confidence=high |
| GO | GO:0005506 (iron ion binding); GO:0005783 (endoplasmic reticulum); GO:0007275 (multicellular organism development); GO:0010268 (brassinosteroid homeostasis); GO:0016125 (sterol metabolic process); GO:0016132 (brassinosteroid biosynthetic process); GO:0020037 (heme binding); GO:0051777 (ent-kaurenoic acid monooxygenase activity) |
| KEGG | smil00904 (Diterpenoid biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00067 (p450) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015858 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057800281.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057800281.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057800281.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057800281.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057800281.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:42585554 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B28 |
Chr3:42585713 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B16,B21,B79,C74 |
Chr3:42586898 |
G |
A |
EMS_canonical_SNV | stop_gained | 10 | B100,B110,B119,B18,B59,B6,B95,C10,C25,C47 |
Chr3:42586910 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A8,B108,B5,B57,C23 |
Chr3:42586943 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B85,C44 |
Chr3:42586950 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B46,D3 |
Chr3:42586984 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B135 |
Chr3:42586986 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B22 |
Chr3:42587033 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C72,D9 |
Chr3:42587093 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B121,C26 |
Chr3:42587233 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B33,B69,C37,C72,D9 |
Chr3:42587341 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B44,C2 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057800281.1PF00067
p450 41-458 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057800281.1 |
Pfam | PF00067 |
p450 | Domain | 41 | 458 | 2.4e-63 | 215.2 | Cytochrome P450 |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。