当前解析结果
SmilChr03G002745| 统一新 Gene ID | SmilChr03G002745 |
|---|---|
| 名称 | SmilChr03G002745 |
| 描述 | uncharacterized SmilChr03G002745 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 43610234 - 43628464 / - |
| NCBI Gene ID | LOC131015921 |
|---|---|
| GeneID | 131015921 |
| locus_tag | - |
| NCBI Name | LOC131015921 |
| 原始查询 | SmilChr03G002745 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os04g0218600; species=rice; confidence=low |
| 产物 | hit=Os04g0218600; species=rice; confidence=low |
| Arabidopsis | -- |
| Rice | Os04g0218600- identity=44.8; qcov=0.413; evalue=0; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015921 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057800413.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057800412.1 |
| 3 | Nucleus membrane | 核膜 | 0.20000 | XP_057800409.1 |
| 4 | Cytosol | 细胞质基质 | 0.20000 | XP_057800409.1 |
| 5 | Trans-golgi network | Trans-golgi network | 0.20000 | XP_057800412.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:43612588 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B88 |
Chr3:43612621 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B88 |
Chr3:43613258 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B124 |
Chr3:43613669 |
G |
A |
EMS_canonical_SNV | stop_gained | 9 | A18,B110,B124,B16,B6,B8,B88,C22,C67 |
Chr3:43614796 |
TG |
T |
1bp_deletion | frameshift_variant | 1 | C15 |
Chr3:43614796 |
TG |
T |
1bp_deletion | CDS_variant | 1 | C15 |
Chr3:43614837 |
A |
AT |
1bp_insertion | frameshift_variant | 9 | A18,B110,B124,B16,B6,B8,B88,C22,C67 |
Chr3:43615042 |
TA |
T |
1bp_deletion | frameshift_variant | 9 | A18,B110,B124,B16,B6,B8,B88,C22,C67 |
Chr3:43615273 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
Chr3:43616873 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B126,B136 |
Chr3:43616998 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A21 |
Chr3:43617069 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B16,B88 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
6 records
下载 cDNA FASTA6 records
下载 CDS FASTA6 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。