当前解析结果
SmilChr03G002930| 统一新 Gene ID | SmilChr03G002930 |
|---|---|
| 名称 | SmilChr03G002930 |
| 描述 | uncharacterized SmilChr03G002930 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 46053309 - 46056854 / - |
| NCBI Gene ID | LOC131016096 |
|---|---|
| GeneID | 131016096 |
| locus_tag | - |
| NCBI Name | LOC131016096 |
| 原始查询 | SmilChr03G002930 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Protein kinase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831544]; symbol=AT5G16810; hit=AT5G16810; species=arabidopsis; confidence=high |
| 产物 | Protein kinase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831544]; symbol=AT5G16810; hit=AT5G16810; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G16810 (AT5G16810)Protein kinase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831544] identity=70.7; qcov=0.899; evalue=0; confidence=high |
| Rice | Os02g0694800- identity=63.9; qcov=0.93; evalue=8.6e-175; confidence=high |
| GO | GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0009507 (chloroplast) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016096 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057800659.1 |
| 2 | Chloroplast stroma | 叶绿体基质 | 1.00000 | XP_057800660.1 |
| 3 | Chloroplast thylakoid | 类囊体 | 0.60000 | XP_057800659.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057800659.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057800659.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:46053751 |
GA |
G |
1bp_deletion | frameshift_variant | 68 | A1,A15,A2,A25,A7,A8,A9,B1,B10,B100,B102,B105,B106,B11,B113,B119,B12,B122,B13,B137,B138,B15,B19,B2,B21,B26,B27,B35,B36,B37,B40,B42,B43,B47,B5,B55,B57,B63,B78,B83,B87,B89,B99,C12,C14,C16,C21,C22,C23,C26,C27,C28,C3,C36,C39,C4,C43,C44,C45,C49,C51,C54,C59,C65,C70,C74,C85,D1 |
Chr3:46054231 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr3:46054830 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr3:46056358 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr3:46056608 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B9 |
Chr3:46056631 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr3:46056656 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,C37 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。