Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G003011`

染色体: Chr03 坐标: 47012946-47018637 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G003011`
名称	SmilChr03G003011
描述	uncharacterized SmilChr03G003011
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	47012946 - 47018637 / `+`

ID 对照

NCBI Gene ID	`LOC131016161`
GeneID	`131016161`
locus_tag	`-`
NCBI Name	`LOC131016161`
原始查询	`SmilChr03G003011`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824111]; symbol=AT3G49490; hit=AT3G49490; species=arabidopsis; confidence=low
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824111]; symbol=AT3G49490; hit=AT3G49490; species=arabidopsis; confidence=low
Arabidopsis	`AT3G49490` (AT3G49490) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824111] identity=27.4; qcov=0.346; evalue=9.63e-18; confidence=low
Rice	`Os10g0537300` - identity=25.1; qcov=0.245; evalue=1.27e-09; confidence=weak
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131016161

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	0.80000	`XP_057800759.1`
2	Cytoplasm	细胞质	0.40000	`XP_057800759.1`
3	Cytosol	细胞质基质	0.40000	`XP_057800770.1`
4	Nucleus membrane	核膜	0.20000	`XP_057800770.1`
5	Chromosome	染色体	0.00000	`XP_057800759.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:47013655`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C13
`Chr3:47013763`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B12,B123,B55,C37
`Chr3:47013803`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B100
`Chr3:47013905`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B38,B39
`Chr3:47013913`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B140,D11,D7
`Chr3:47013924`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B140,D11,D7
`Chr3:47014004`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B140,D11,D7
`Chr3:47015509`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr3:47015701`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B97
`Chr3:47015704`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B140,D11,D7
`Chr3:47015743`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B12,B123,B55,C37
`Chr3:47015776`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B20,B50,B60

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

12 records

下载 cDNA FASTA

XM_057944777.1
AGGTGATAATTTCCAACACCCAAATAGCTTTTTTGGCTTTAGCTCGTTGAAAATCGAGACGTTTTGAGTGTAAGAAACTAAAAACGTGGCTAATTGGAATGCAATTTCGGCGAAAATGGGAAAGCTTTTGAGATTAAGAATCCCACAACAAACCAAACGACACGAAACGAGGCACACGCGATACTTCGCTTTGAAGGGTGGAGATTTTTAGTCAGAGGGAGAAAAGGGGCCGACTTTTTTTTTTGGGGTTTTCTCTATCT...

XM_057944782.1
AGGTGATAATTTCCAACACCCAAATAGCTTTTTTGGCTTTAGCTCGTTGAAAATCGAGACGTTTTGAGTGTAAGAAACTAAAAACGTGGCTAATTGGAATGCAATTTCGGCGAAAATGGGAAAGCTTTTGAGATTAAGAATCCCACAACAAACCAAACGACACGAAACGAGGCACACGCGATACTTCGCTTTGAAGGGTGGAGATTTTTAGTCAGAGGGAGAAAAGGGGCCGACTTTTTTTTTTGGGGTTTTCTCTATCT...

CDS

12 records

下载 CDS FASTA

LOC131016161
ATGATCGGTTTGAGCTCAATGGGTTGCGGAGGAGGAGGGAATTCATCGACATCAAATCTATCTGCTTCTGCACCTCCCTTTACTGTCGATAGATTAAACCCTAAGCCCAATTCAAACCCTATGTTGCATTACTCCGATTATGGGGTTGAGCCCTTTACCCATTCCTCTCAGTATCCGATTAGAGCTGAGGCTGCAATTGATTCTGGTGAGATGATTAGCGTGCCTACCACGGATGATTATCGATTTTCGGCCTCTGCCTC...

Protein

12 records

下载 Protein FASTA

XP_057800759.1
MIGLSSMGCGGGGNSSTSNLSASAPPFTVDRLNPKPNSNPMLHYSDYGVEPFTHSSQYPIRAEAAIDSGEMISVPTTDDYRFSASASVSAPSTQWSGHNSGYGGDVKPYYSPYVTSLVGEDRVLGEDEGSRYNVVPTCGLSVTPQHDYTPSLFDLEYGPRWVDGLGFDDGKRAKRSEVDGKFSSEKLFIGGSHGYENQLYQGGCGSENRNQFKEDSGVLYKNLHQVSDREVYTGSSSTGYMEDKSCLEQQFGFFHYDSSK...

XP_057800760.1
MIGLSSMGCGGGGNSSTSNLSASAPPFTVDRLNPKPNSNPMLHYSDYGVEPFTHSSQYPIRAEAAIDSGEMISVPTTDDYRFSASASVSAPSTQWSGHNSGYGGDVKPYYSPYVTSLVGEDRVLGEDEGSRYNVVPTCGLSVTPQHDYTPSLFDLEYGPRWVDGLGFDDGKRAKRSEVDGKFSSEKLFIGGSHGYENQLYQGGCGSENRNQFKEDSGVLYKNLHQVSDREVYTGSSSTGYMEDKSCLEQQFGFFHYDSSK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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