Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G003069`

染色体: Chr03 坐标: 47647448-47651442 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G003069`
名称	SmilChr03G003069
描述	aluminum-activated malate transporter 13-like
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	47647448 - 47651442 / `-`

ID 对照

NCBI Gene ID	`LOC131016216`
GeneID	`131016216`
locus_tag	`-`
NCBI Name	`LOC131016216`
原始查询	`SmilChr03G003069`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	aluminum-activated malate transporter 13-like
产物	aluminum-activated malate transporter 13-like
Arabidopsis	`AT5G46610` (AT5G46610) aluminum activated malate transporter family protein [Source:NCBI gene (formerly Entrezgene);Acc:834704] identity=31.6; qcov=0.818; evalue=1.34e-27; confidence=low
Rice	`Os10g0572100` (OsALMT2) - identity=43.6; qcov=0.318; evalue=3.23e-26; confidence=low
GO	GO:0009705 (plant-type vacuole membrane); GO:0015743 (malate transport)
KEGG	-
Pfam	PF04632 (FUSC); PF11744 (ALMT); PF13515 (FUSC_2)
InterPro	-
eggNOG	-
NR	GeneID:131016216

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057800838.1`
2	Endoplasmic reticulum	内质网	0.20000	`XP_057800839.1`
3	Nucleus	细胞核	0.00000	`XP_057800838.1`
4	Chromosome	染色体	0.00000	`XP_057800838.1`
5	Centromere	着丝粒	0.00000	`XP_057800838.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:47649800`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B101,B134,D6
`Chr3:47649866`	`AGT`	`A`	2bp_deletion	frameshift_variant	1	B39
`Chr3:47649866`	`AGT`	`A`	2bp_deletion	CDS_variant	1	B39

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057800838.1

459 aa

230

459

ALMT

FUSC_2

FUSC

PF11744 ALMT 68-387 aa PF13515 FUSC_2 99-228 aa PF04632 FUSC 102-261 aa

XP_057800839.1

368 aa

184

368

ALMT

FUSC_2

ALMT

PF11744 ALMT 68-175 aa PF13515 FUSC_2 99-166 aa PF11744 ALMT 165-296 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057800838.1`	Pfam	`PF11744`	ALMT	Family	68	387	5.4e-114	382.4	Aluminium activated malate transporter
`XP_057800838.1`	Pfam	`PF13515`	FUSC_2	Family	99	228	7.4e-11	43.0	Fusaric acid resistance protein-like
`XP_057800838.1`	Pfam	`PF04632`	FUSC	Family	102	261	9.3e-10	38.5	Fusaric acid resistance protein family
`XP_057800839.1`	Pfam	`PF11744`	ALMT	Family	68	175	5e-65	220.9	Aluminium activated malate transporter
`XP_057800839.1`	Pfam	`PF13515`	FUSC_2	Family	99	166	7.7e-08	33.2	Fusaric acid resistance protein-like
`XP_057800839.1`	Pfam	`PF11744`	ALMT	Family	165	296	5e-65	220.9	Aluminium activated malate transporter

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057944856.1
TCAAACTCAAATGGCATCAAAGAAACTGAATGAGTGTCATCAAATTATCCTAAGCATTTTTTATTTTTATTACTTTTGTTGGTTGTTACGTACAAGCATGAGTTCTACTACTGCTGCAAATGGAAGTAAGAAGGGAGATAAAAATGAGGAATCATGTTTATGGTCATTTTGGTTTGAAGGTTTTGCTTCGATTATTAAGGAAATATGTAATAAAAGTGACAAAAGGAGGATTATTCACAGCATCAAAGTAGGAGTGGCTT...

XM_057944855.1
CAAACTCAAATGGCATCAAAGAAACTGAATGAGTGTCATCAAATTATCCTAAGCATTTTTTATTTTTATTACTTTTGTTGGTTGTTACGTACAAGCATGAGTTCTACTACTGCTGCAAATGGAAGTAAGAAGGGAGATAAAAATGAGGAATCATGTTTATGGTCATTTTGGTTTGAAGGTTTTGCTTCGATTATTAAGGAAATATGTAATAAAAGTGACAAAAGGAGGATTATTCACAGCATCAAAGTAGGAGTGGCTTT...

CDS

2 records

下载 CDS FASTA

LOC131016216
ATGGCATCAAAGAAACTGAATGAGTGTCATCAAATTATCCTAAGCATTTTTTATTTTTATTACTTTTGTTGGTTGTTACGTACAAGCATGAGTTCTACTACTGCTGCAAATGGAAGTAAGAAGGGAGATAAAAATGAGGAATCATGTTTATGGTCATTTTGGTTTGAAGGTTTTGCTTCGATTATTAAGGAAATATGTAATAAAAGTGACAAAAGGAGGATTATTCACAGCATCAAAGTAGGAGTGGCTTTGGTTCTTGT...

Protein

2 records

下载 Protein FASTA

XP_057800838.1
MASKKLNECHQIILSIFYFYYFCWLLRTSMSSTTAANGSKKGDKNEESCLWSFWFEGFASIIKEICNKSDKRRIIHSIKVGVALVLVSLLYLVNSMFKQIGENAMWAIMTVVVMFELYAGATLSKGINRGIGTLVGGGMGCLAAVLAAENEGIAKPTTIATSLFLYGTVATYYRMVPKIKKRYDYGFMISILTFNLVAVSGVRAEKVVEVARDRLAAIGMGFTLCIFVNLFAYPIWASNELHFSTASKFNKLANSIQGCF...

XP_057800839.1
MASKKLNECHQIILSIFYFYYFCWLLRTSMSSTTAANGSKKGDKNEESCLWSFWFEGFASIIKEICNKSDKRRIIHSIKVGVALVLVSLLYLVNSMFKQIGENAMWAIMTVVVMFELYAGATLSKGINRGIGTLVGGGMGCLAAVLAAENEGIAKPTTIATSLFLYGCFDEYFKLGHDKENHDKVGDGSASIQACKIVINSKSNDEALANHAKWEPWHGKFGLYYPWDKYLEIGEHLRELAATIISLKGCLQSPKQPPPL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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