当前解析结果
SmilChr03G003155| 统一新 Gene ID | SmilChr03G003155 |
|---|---|
| 名称 | SmilChr03G003155 |
| 描述 | uncharacterized SmilChr03G003155 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 48912586 - 49521892 / - |
| NCBI Gene ID | LOC131016333 |
|---|---|
| GeneID | 131016333 |
| locus_tag | - |
| NCBI Name | LOC131016333 |
| 原始查询 | SmilChr03G003155 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:825514]; symbol=AT3G63390; hit=AT3G63390; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:825514]; symbol=AT3G63390; hit=AT3G63390; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G63390 (AT3G63390)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:825514] identity=51.5; qcov=0.611; evalue=1.17e-32; confidence=medium |
| Rice | Os11g0616200- identity=41.7; qcov=0.944; evalue=8.27e-31; confidence=medium |
| GO | GO:0009536 (plastid) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016333 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Secreted | 分泌到胞外 | 0.60000 | XP_057801006.1 |
| 2 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057801006.1 |
| 3 | Vacuole | 液泡 | 0.20000 | XP_057801006.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057801006.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057801006.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:49520741 |
CTT |
C |
2bp_deletion | frameshift_variant | 17 | A1,B103,B106,B107,B108,B132,B3,B47,B57,B64,B74,C15,C20,C24,C56,C7,C79 |
Chr3:49521204 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B7,B76 |
Chr3:49521298 |
G |
GAT |
2bp_insertion | frameshift_variant | 1 | B29 |
Chr3:49521298 |
G |
GAT |
2bp_insertion | CDS_variant | 1 | B29 |
Chr3:49521338 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B73 |
Chr3:49521364 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B124,B49,B6,B79,C55 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。