Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G003171`

染色体: Chr03 坐标: 49083245-49091468 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G003171`
名称	SmilChr03G003171
描述	protein NETWORKED 1D
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	49083245 - 49091468 / `+`

ID 对照

NCBI Gene ID	`LOC131016305`
GeneID	`131016305`
locus_tag	`-`
NCBI Name	`LOC131016305`
原始查询	`SmilChr03G003171`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	protein NETWORKED 1D
产物	protein NETWORKED 1D
Arabidopsis	`AT1G03080` (NET1D) kinase interacting (KIP1-like) family protein [Source:NCBI gene (formerly Entrezgene);Acc:838350] identity=42.3; qcov=1.03; evalue=0; confidence=medium
Rice	`Os03g0161100` - identity=24.7; qcov=0.95; evalue=8.29e-81; confidence=weak
GO	GO:0005886 (plasma membrane); GO:0051015 (actin filament binding)
KEGG	-
Pfam	PF07765 (KIP1)
InterPro	-
eggNOG	-
NR	GeneID:131016305

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Trans-golgi network	Trans-golgi network	0.40000	`XP_057800951.1`
2	Cytoskeleton	细胞骨架	0.20000	`XP_057800951.1`
3	Phragmoplast	Phragmoplast	0.20000	`XP_057800951.1`
4	Cytosol	细胞质基质	0.20000	`XP_057800951.1`
5	Cell membrane	细胞膜	0.20000	`XP_057800951.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:49085190`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C6
`Chr3:49085321`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B97
`Chr3:49085594`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B59,C83
`Chr3:49085628`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B4
`Chr3:49085669`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B140,B75,C54,D1
`Chr3:49085704`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B75,C54
`Chr3:49085864`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B140,B75,C54,D1
`Chr3:49085896`	`GAA`	`G`	2bp_deletion	frameshift_variant	1	B115
`Chr3:49085896`	`GAA`	`G`	2bp_deletion	CDS_variant	1	B115
`Chr3:49086059`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B140,D1
`Chr3:49086225`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B123
`Chr3:49086321`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B4

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057800951.1

1759 aa

880

1759

KIP1

PF07765 KIP1 14-87 aa

XP_057800952.1

1759 aa

880

1759

KIP1

PF07765 KIP1 14-87 aa

XP_057800953.1

1759 aa

880

1759

KIP1

PF07765 KIP1 14-87 aa

XP_057800954.1

1759 aa

880

1759

KIP1

PF07765 KIP1 14-87 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057800951.1`	Pfam	`PF07765`	KIP1	Family	14	87	3.3e-36	123.9	KIP1-like protein
`XP_057800952.1`	Pfam	`PF07765`	KIP1	Family	14	87	3.3e-36	123.9	KIP1-like protein
`XP_057800953.1`	Pfam	`PF07765`	KIP1	Family	14	87	3.3e-36	123.9	KIP1-like protein
`XP_057800954.1`	Pfam	`PF07765`	KIP1	Family	14	87	3.3e-36	123.9	KIP1-like protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057944968.1
TTTTCTATTATTGTTGTGACCTAGATGATCGATGCGGAGTCAGCAACTCACAGCGCAACATATACATACACAAAAATATACGCAAACAACAACAGCAGCAACAGCAAACAGAATTTATTTCGAGGAGAGCGTGTTGTAGAGAGAGAAAGACAAAGTGAAAGATCTGAAAAAGCAAAGCAAATGGGGCGAGTGAGATGAGAGAGATAAACTGAAAAGCAGCTCTACTGTCTCTCTTGTTTTTATTTTATCACACCAACCAA...

XM_057944970.1
TGTTGTGACCTAGATGATCGATGCGGAGTCAGCAACTCACAGCGCAACATATACATACACAAAAATATACGCAAACAACAACAGCAGCAACAGCAAACAGAATTTATTTCGAGGAGAGCGTGTTGTAGAGAGAGAAAGACAAAGTGAAAGATCTGAAAAAGCAAAGCAAATGGGGCGAGTGAGATGAGAGAGATAAACTGAAAAGCAGCTCTACTGTCTCTCTTGTTTTTATTTTATCACACCAACCAATCCATAATTCA...

CDS

4 records

下载 CDS FASTA

LOC131016305
ATGGCCAAGTTGTCGCATTCAGATTCCAGACGGATGTATTCCTGGTGGTGGGATAGTCATATTAGCCCCAAAAATTCAAAATGGCTCCAGGAAAATCTCACAGATATGGATGTCAAAGTTAAATCAATGATAAAGCTCCTTGAAGTGGATGAGGACTCCTTTGCGAGAAGGGCGGAGATGTACTACAAGAAAAGACCAGAGCTTATGAAAATGGTTGAGGAGTTTTATAGAGCATATCGTGCATTGGCTGAAAGATATGA...

Protein

4 records

下载 Protein FASTA

XP_057800951.1
MAKLSHSDSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKSMIKLLEVDEDSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMTEAQVPMMFADDSPASSVSGADPRTPDLIGDFTDESDSGTRKRTSKPFTGSLGAVERVRRGLNFDEAEDKEESVSSNENNHVGNKKSLKMDRQSDSKEILALKEAIAKLEAEKEAGFVQYQQTLDKLSQLDTEISKTREDFNMLQDHANKADIEVATLSE...

XP_057800952.1
MAKLSHSDSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKSMIKLLEVDEDSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMTEAQVPMMFADDSPASSVSGADPRTPDLIGDFTDESDSGTRKRTSKPFTGSLGAVERVRRGLNFDEAEDKEESVSSNENNHVGNKKSLKMDRQSDSKEILALKEAIAKLEAEKEAGFVQYQQTLDKLSQLDTEISKTREDFNMLQDHANKADIEVATLSE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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