当前解析结果
SmilChr03G003231| 统一新 Gene ID | SmilChr03G003231 |
|---|---|
| 名称 | SmilChr03G003231 |
| 描述 | uncharacterized SmilChr03G003231 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 50070376 - 50072904 / + |
| NCBI Gene ID | LOC131018945 |
|---|---|
| GeneID | 131018945 |
| locus_tag | - |
| NCBI Name | LOC131018945 |
| 原始查询 | SmilChr03G003231 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0292200; species=rice; confidence=weak |
| 产物 | hit=Os12g0292200; species=rice; confidence=weak |
| Arabidopsis | -- |
| Rice | Os12g0292200- identity=28.2; qcov=0.121; evalue=1.45e-06; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018945 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057803610.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057803610.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057803610.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057803610.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057803610.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:50070408 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A14,B94,C26,C33 |
Chr3:50070415 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B105,B120,B58 |
Chr3:50070423 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B122,C31,C65 |
Chr3:50070431 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B104,B13,B80 |
Chr3:50070432 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A22,C27 |
Chr3:50070443 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B35,C68 |
Chr3:50070452 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B125,B80,C1,C60,C62 |
Chr3:50070466 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C33 |
Chr3:50070471 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B109,B67,B71,B88,B94 |
Chr3:50070475 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B122,C69,D5 |
Chr3:50070506 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr3:50070514 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B104 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。