当前解析结果
SmilChr03G003240| 统一新 Gene ID | SmilChr03G003240 |
|---|---|
| 名称 | SmilChr03G003240 |
| 描述 | uncharacterized SmilChr03G003240 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 50305301 - 50306042 / - |
| NCBI Gene ID | LOC131016381 |
|---|---|
| GeneID | 131016381 |
| locus_tag | - |
| NCBI Name | LOC131016381 |
| 原始查询 | SmilChr03G003240 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | ankyrin repeat family protein [Source:NCBI gene (formerly Entrezgene);Acc:819629]; symbol=TPR10; hit=AT3G04710; species=arabidopsis; confidence=low |
| 产物 | ankyrin repeat family protein [Source:NCBI gene (formerly Entrezgene);Acc:819629]; symbol=TPR10; hit=AT3G04710; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G04710 (TPR10)ankyrin repeat family protein [Source:NCBI gene (formerly Entrezgene);Acc:819629] identity=34.8; qcov=0.789; evalue=4.82e-12; confidence=low |
| Rice | Os03g0680200- identity=39.5; qcov=0.768; evalue=7.81e-12; confidence=low |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016381 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.60000 | XP_057801056.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057801056.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057801056.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057801056.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057801056.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:50305555 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B139,B29 |
Chr3:50305993 |
GT |
G |
1bp_deletion | frameshift_variant | 1 | C16 |
Chr3:50305993 |
GT |
G |
1bp_deletion | CDS_variant | 1 | C16 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。