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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr03G003343

染色体: Chr03 坐标: 51757803-51765426 链方向: - 类型: protein_coding

基本信息

统一新 Gene IDSmilChr03G003343
名称SmilChr03G003343
描述uncharacterized SmilChr03G003343
染色体 / SeqIDChr03 / NC_080389.1
坐标与链方向51757803 - 51765426 / -

ID 对照

NCBI Gene IDLOC131014236
GeneID131014236
locus_tag-
NCBI NameLOC131014236
原始查询SmilChr03G003343

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述Serine/Threonine-kinase [Source:NCBI gene (formerly Entrezgene);Acc:816570]; symbol=AT2G20495; hit=AT2G20495; species=arabidopsis; confidence=high
产物Serine/Threonine-kinase [Source:NCBI gene (formerly Entrezgene);Acc:816570]; symbol=AT2G20495; hit=AT2G20495; species=arabidopsis; confidence=high
ArabidopsisAT2G20495 (AT2G20495)
Serine/Threonine-kinase [Source:NCBI gene (formerly Entrezgene);Acc:816570]
identity=59.6; qcov=0.959; evalue=2.38e-82; confidence=high
RiceOs07g0458800
-
identity=55.7; qcov=0.955; evalue=6.72e-79; confidence=high
GOGO:0004674 (protein serine/threonine kinase activity); GO:0006468 (protein phosphorylation)
KEGG-
PfamPF10494 (Stk19)
InterPro-
eggNOG-
NRGeneID:131014236

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Nucleus 细胞核 1.00000 XP_057798112.1
2 Chromosome 染色体 1.00000 XP_057798122.1
3 Telomere 端粒 0.80000 XP_057798122.1
4 Cytoplasm 细胞质 0.40000 XP_057798118.1
5 Centromere 着丝粒 0.40000 XP_057798122.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr3:51758373 G A EMS_canonical_SNV CDS_variant 2 B131,B72
Chr3:51758392 G A EMS_canonical_SNV CDS_variant 4 B118,B136,C55,D8
Chr3:51758427 C T EMS_canonical_SNV CDS_variant 1 B46
Chr3:51758752 G A EMS_canonical_SNV CDS_variant 2 B128,B32
Chr3:51761228 G A EMS_canonical_SNV CDS_variant 3 A4,B35,B74
Chr3:51762744 C T EMS_canonical_SNV CDS_variant 4 B118,B136,C55,D8
Chr3:51765008 C T EMS_canonical_SNV CDS_variant 4 B46,C78,D2,D5
Chr3:51765270 C T EMS_canonical_SNV CDS_variant 1 C54
Chr3:51765315 C T EMS_canonical_SNV CDS_variant 1 D5

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057798112.1
274 aa
N
1
137
274
Stk19
C
PF10494 Stk19 63-271 aa
XP_057798113.1
274 aa
N
1
137
274
Stk19
C
PF10494 Stk19 63-271 aa
XP_057798114.1
265 aa
N
1
132
265
Stk19
C
PF10494 Stk19 42-262 aa
XP_057798115.1
265 aa
N
1
132
265
Stk19
C
PF10494 Stk19 42-262 aa
XP_057798116.1
250 aa
N
1
125
250
Stk19
Stk19
C
PF10494 Stk19 63-158 aa PF10494 Stk19 157-247 aa
XP_057798117.1
250 aa
N
1
125
250
Stk19
Stk19
C
PF10494 Stk19 63-158 aa PF10494 Stk19 157-247 aa
XP_057798118.1
241 aa
N
1
120
241
Stk19
Stk19
C
PF10494 Stk19 42-150 aa PF10494 Stk19 146-238 aa
XP_057798120.1
241 aa
N
1
120
241
Stk19
Stk19
C
PF10494 Stk19 42-150 aa PF10494 Stk19 146-238 aa
XP_057798121.1
227 aa
N
1
114
227
Stk19
C
PF10494 Stk19 63-188 aa
XP_057798122.1
222 aa
N
1
111
222
Stk19
C
PF10494 Stk19 63-211 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057798112.1 Pfam PF10494 Stk19 Family 63 271 5e-39 135.2 Inactive serine-threonine protein kinase 19
XP_057798113.1 Pfam PF10494 Stk19 Family 63 271 5e-39 135.2 Inactive serine-threonine protein kinase 19
XP_057798114.1 Pfam PF10494 Stk19 Family 42 262 2.6e-37 129.5 Inactive serine-threonine protein kinase 19
XP_057798115.1 Pfam PF10494 Stk19 Family 42 262 2.6e-37 129.5 Inactive serine-threonine protein kinase 19
XP_057798116.1 Pfam PF10494 Stk19 Family 63 158 7.3e-35 121.5 Inactive serine-threonine protein kinase 19
XP_057798116.1 Pfam PF10494 Stk19 Family 157 247 7.3e-35 121.5 Inactive serine-threonine protein kinase 19
XP_057798117.1 Pfam PF10494 Stk19 Family 63 158 7.3e-35 121.5 Inactive serine-threonine protein kinase 19
XP_057798117.1 Pfam PF10494 Stk19 Family 157 247 7.3e-35 121.5 Inactive serine-threonine protein kinase 19
XP_057798118.1 Pfam PF10494 Stk19 Family 42 150 3.6e-33 116.0 Inactive serine-threonine protein kinase 19
XP_057798118.1 Pfam PF10494 Stk19 Family 146 238 3.6e-33 116.0 Inactive serine-threonine protein kinase 19
XP_057798120.1 Pfam PF10494 Stk19 Family 42 150 3.6e-33 116.0 Inactive serine-threonine protein kinase 19
XP_057798120.1 Pfam PF10494 Stk19 Family 146 238 3.6e-33 116.0 Inactive serine-threonine protein kinase 19
XP_057798121.1 Pfam PF10494 Stk19 Family 63 188 3.6e-18 66.7 Inactive serine-threonine protein kinase 19
XP_057798122.1 Pfam PF10494 Stk19 Family 63 211 2.5e-22 80.4 Inactive serine-threonine protein kinase 19

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

12 records

下载 cDNA FASTA
XR_009098114.1
ACTTTTCACTACTAAAATAAGACAAGAACAGAACGCAGGAAACAAAATAAGAAACGAGTTGGTTTGGAAGATTCAGTGAAATATGAGTAAGAAAATTCCGGAGTTGGAGCCATCAACAAGCAGGAAGCGCCCACGGCATGAGGAGGCAGAGCCCCAAACAGAAAAGGATGTTGAAAATTCACCTTCTCTTTCTTTAGAGGACAATTTCACATTCAGTGATACTTTGATGGCGCTTCGGATGATGCGCGCTCAGTTTCCTC...
XR_009098113.1
GACAAGAACAGAACGCAGGAAACAAAATAAGAAACGAGTTGGTTTGGAAGATTCAGTGAAATATGAGTAAGAAAATTCCGGAGTTGGAGCCATCAACAAGCAGGAAGCGCCCACGGCATGAGGAGGCAGAGCCCCAAACAGAAAAGGATGTTGAAAATTCACCTTCTCTTTCTTTAGAGGACAATTTCACATTCAGTGATACTTTGATGGCGCTTCGGATGATGCGCGCTCAGTTTCCTCACATTCAAAAGGTTTCAATT...

CDS

10 records

下载 CDS FASTA
LOC131014236
ATGAGTAAGAAAATTCCGGAGTTGGAGCCATCAACAAGCAGGAAGCGCCCACGGCATGAGGAGGCAGAGCCCCAAACAGAAAAGGATGTTGAAAATTCACCTTCTCTTTCTTTAGAGGACAATTTCACATTCAGTGATACTTTGATGGCGCTTCGGATGATGCGCGCTCAGTTTCCTCACATTCAAAAGTCGCAGTTGTACAGCAGCATAAAAAATAGGACTGAAGTGGACAGGGAAATAGAGTCTCTTAAGAGGGAAAG...
LOC131014236
ATGAGTAAGAAAATTCCGGAGTTGGAGCCATCAACAAGCAGGAAGCGCCCACGGCATGAGGAGGCAGAGCCCCAAACAGAAAAGGATGTTGAAAATTCACCTTCTCTTTCTTTAGAGGACAATTTCACATTCAGTGATACTTTGATGGCGCTTCGGATGATGCGCGCTCAGTTTCCTCACATTCAAAAGTCGCAGTTGTACAGCAGCATAAAAAATAGGACTGAAGTGGACAGGGAAATAGAGTCTCTTAAGAGGGAAAG...

Protein

10 records

下载 Protein FASTA
XP_057798112.1
MSKKIPELEPSTSRKRPRHEEAEPQTEKDVENSPSLSLEDNFTFSDTLMALRMMRAQFPHIQKVSIPPFVLQSQLYSSIKNRTEVDREIESLKRERVVRIFKLNTGQDDHAIMFTDDYINQIEHVVRRMEEKNTNNLVVFEWFKTHVIQSKLDTSIGHQELWSFLSLGGKVKEEHISQLISAGLLIRQLIDQNMYWFSIPNIGSVLKGLSQGRKELLSLLNRRKYKEMMMASLEMKRLRFSPLDMRFHLRDLIGSGQLKI...
XP_057798113.1
MSKKIPELEPSTSRKRPRHEEAEPQTEKDVENSPSLSLEDNFTFSDTLMALRMMRAQFPHIQKVSIPPFVLQSQLYSSIKNRTEVDREIESLKRERVVRIFKLNTGQDDHAIMFTDDYINQIEHVVRRMEEKNTNNLVVFEWFKTHVIQSKLDTSIGHQELWSFLSLGGKVKEEHISQLISAGLLIRQLIDQNMYWFSIPNIGSVLKGLSQGRKELLSLLNRRKYKEMMMASLEMKRLRFSPLDMRFHLRDLIGSGQLKI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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