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Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr03G003347

染色体: Chr03 坐标: 51787718-51798385 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr03G003347
名称SmilChr03G003347
描述uncharacterized SmilChr03G003347
染色体 / SeqIDChr03 / NC_080389.1
坐标与链方向51787718 - 51798385 / +

ID 对照

NCBI Gene IDLOC131014241
GeneID131014241
locus_tag-
NCBI NameLOC131014241
原始查询SmilChr03G003347

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:816567]; symbol=AT2G20470; hit=AT2G20470; species=arabidopsis; confidence=high
产物AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:816567]; symbol=AT2G20470; hit=AT2G20470; species=arabidopsis; confidence=high
ArabidopsisAT2G20470 (AT2G20470)
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:816567]
identity=79; qcov=0.981; evalue=0; confidence=high
RiceOs10g0476100
-
identity=73.7; qcov=0.998; evalue=0; confidence=high
GOGO:0004674 (protein serine/threonine kinase activity); GO:0005524 (ATP binding); GO:0018105 (peptidyl-serine phosphorylation); GO:0035556 (intracellular signal transduction)
KEGG-
PfamPF00069 (Pkinase); PF00433 (Pkinase_C); PF03109 (ABC1); PF07714 (PK_Tyr_Ser-Thr)
InterPro-
eggNOG-
NRGeneID:131014241

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Nucleus 细胞核 1.00000 XP_057798126.1
2 Cytoplasm 细胞质 1.00000 XP_057798126.1
3 Cytosol 细胞质基质 1.00000 XP_057798129.1
4 Nucleoplasm 核质 0.20000 XP_057798126.1
5 Chromosome 染色体 0.00000 XP_057798126.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr3:51789070 C T EMS_canonical_SNV CDS_variant 2 C58,C85
Chr3:51793092 TG T 1bp_deletion frameshift_variant 1 B13
Chr3:51793092 TG T 1bp_deletion CDS_variant 1 B13
Chr3:51797978 C T EMS_canonical_SNV CDS_variant 1 B17

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057798126.1
531 aa
N
1
266
531
PK_Tyr_Ser-Thr
Pkinase
ABC1
Pkinase
Pkinase_C
C
PF07714 PK_Tyr_Ser-Thr 125-272 aa PF00069 Pkinase 125-276 aa PF03109 ABC1 198-274 aa PF00069 Pkinase 318-421 aa PF00433 Pkinase_C 440-485 aa
XP_057798127.1
531 aa
N
1
266
531
PK_Tyr_Ser-Thr
Pkinase
ABC1
Pkinase
Pkinase_C
C
PF07714 PK_Tyr_Ser-Thr 125-272 aa PF00069 Pkinase 125-276 aa PF03109 ABC1 198-274 aa PF00069 Pkinase 318-421 aa PF00433 Pkinase_C 440-485 aa
XP_057798128.1
531 aa
N
1
266
531
PK_Tyr_Ser-Thr
Pkinase
ABC1
Pkinase
Pkinase_C
C
PF07714 PK_Tyr_Ser-Thr 125-272 aa PF00069 Pkinase 125-276 aa PF03109 ABC1 198-274 aa PF00069 Pkinase 318-421 aa PF00433 Pkinase_C 440-485 aa
XP_057798129.1
531 aa
N
1
266
531
PK_Tyr_Ser-Thr
Pkinase
ABC1
Pkinase
Pkinase_C
C
PF07714 PK_Tyr_Ser-Thr 125-272 aa PF00069 Pkinase 125-276 aa PF03109 ABC1 198-274 aa PF00069 Pkinase 318-421 aa PF00433 Pkinase_C 440-485 aa
XP_057798130.1
531 aa
N
1
266
531
PK_Tyr_Ser-Thr
Pkinase
ABC1
Pkinase
Pkinase_C
C
PF07714 PK_Tyr_Ser-Thr 125-272 aa PF00069 Pkinase 125-276 aa PF03109 ABC1 198-274 aa PF00069 Pkinase 318-421 aa PF00433 Pkinase_C 440-485 aa
XP_057798131.1
530 aa
N
1
265
530
PK_Tyr_Ser-Thr
Pkinase
ABC1
Pkinase
Pkinase_C
C
PF07714 PK_Tyr_Ser-Thr 125-272 aa PF00069 Pkinase 125-276 aa PF03109 ABC1 198-274 aa PF00069 Pkinase 318-421 aa PF00433 Pkinase_C 440-484 aa
XP_057798133.1
530 aa
N
1
265
530
PK_Tyr_Ser-Thr
Pkinase
ABC1
Pkinase
Pkinase_C
C
PF07714 PK_Tyr_Ser-Thr 125-272 aa PF00069 Pkinase 125-276 aa PF03109 ABC1 198-274 aa PF00069 Pkinase 318-421 aa PF00433 Pkinase_C 440-484 aa
XP_057798134.1
530 aa
N
1
265
530
PK_Tyr_Ser-Thr
Pkinase
ABC1
Pkinase
Pkinase_C
C
PF07714 PK_Tyr_Ser-Thr 125-272 aa PF00069 Pkinase 125-276 aa PF03109 ABC1 198-274 aa PF00069 Pkinase 318-421 aa PF00433 Pkinase_C 440-484 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057798126.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 125 272 3.6e-28 99.3 Protein tyrosine and serine/threonine kinase
XP_057798126.1 Pfam PF00069 Pkinase Domain 125 276 4.3e-66 223.7 Protein kinase domain
XP_057798126.1 Pfam PF03109 ABC1 Domain 198 274 7.7e-07 29.2 ABC1 atypical kinase-like domain
XP_057798126.1 Pfam PF00069 Pkinase Domain 318 421 4.3e-66 223.7 Protein kinase domain
XP_057798126.1 Pfam PF00433 Pkinase_C Family 440 485 3.1e-07 31.7 Protein kinase C terminal domain
XP_057798127.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 125 272 3.6e-28 99.3 Protein tyrosine and serine/threonine kinase
XP_057798127.1 Pfam PF00069 Pkinase Domain 125 276 4.3e-66 223.7 Protein kinase domain
XP_057798127.1 Pfam PF03109 ABC1 Domain 198 274 7.7e-07 29.2 ABC1 atypical kinase-like domain
XP_057798127.1 Pfam PF00069 Pkinase Domain 318 421 4.3e-66 223.7 Protein kinase domain
XP_057798127.1 Pfam PF00433 Pkinase_C Family 440 485 3.1e-07 31.7 Protein kinase C terminal domain
XP_057798128.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 125 272 3.6e-28 99.3 Protein tyrosine and serine/threonine kinase
XP_057798128.1 Pfam PF00069 Pkinase Domain 125 276 4.3e-66 223.7 Protein kinase domain
XP_057798128.1 Pfam PF03109 ABC1 Domain 198 274 7.7e-07 29.2 ABC1 atypical kinase-like domain
XP_057798128.1 Pfam PF00069 Pkinase Domain 318 421 4.3e-66 223.7 Protein kinase domain
XP_057798128.1 Pfam PF00433 Pkinase_C Family 440 485 3.1e-07 31.7 Protein kinase C terminal domain
XP_057798129.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 125 272 3.6e-28 99.3 Protein tyrosine and serine/threonine kinase
XP_057798129.1 Pfam PF00069 Pkinase Domain 125 276 4.3e-66 223.7 Protein kinase domain
XP_057798129.1 Pfam PF03109 ABC1 Domain 198 274 7.9e-07 29.2 ABC1 atypical kinase-like domain
XP_057798129.1 Pfam PF00069 Pkinase Domain 318 421 4.3e-66 223.7 Protein kinase domain
XP_057798129.1 Pfam PF00433 Pkinase_C Family 440 485 3.3e-07 31.6 Protein kinase C terminal domain
XP_057798130.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 125 272 3.6e-28 99.3 Protein tyrosine and serine/threonine kinase
XP_057798130.1 Pfam PF00069 Pkinase Domain 125 276 4.3e-66 223.7 Protein kinase domain
XP_057798130.1 Pfam PF03109 ABC1 Domain 198 274 7.9e-07 29.2 ABC1 atypical kinase-like domain
XP_057798130.1 Pfam PF00069 Pkinase Domain 318 421 4.3e-66 223.7 Protein kinase domain
XP_057798130.1 Pfam PF00433 Pkinase_C Family 440 485 3.3e-07 31.6 Protein kinase C terminal domain
XP_057798131.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 125 272 3.5e-28 99.3 Protein tyrosine and serine/threonine kinase
XP_057798131.1 Pfam PF00069 Pkinase Domain 125 276 4.2e-66 223.7 Protein kinase domain
XP_057798131.1 Pfam PF03109 ABC1 Domain 198 274 7.7e-07 29.2 ABC1 atypical kinase-like domain
XP_057798131.1 Pfam PF00069 Pkinase Domain 318 421 4.2e-66 223.7 Protein kinase domain
XP_057798131.1 Pfam PF00433 Pkinase_C Family 440 484 1.4e-09 39.3 Protein kinase C terminal domain
XP_057798133.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 125 272 3.5e-28 99.3 Protein tyrosine and serine/threonine kinase
XP_057798133.1 Pfam PF00069 Pkinase Domain 125 276 4.2e-66 223.7 Protein kinase domain
XP_057798133.1 Pfam PF03109 ABC1 Domain 198 274 7.7e-07 29.2 ABC1 atypical kinase-like domain
XP_057798133.1 Pfam PF00069 Pkinase Domain 318 421 4.2e-66 223.7 Protein kinase domain
XP_057798133.1 Pfam PF00433 Pkinase_C Family 440 484 1.4e-09 39.3 Protein kinase C terminal domain
XP_057798134.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 125 272 3.6e-28 99.3 Protein tyrosine and serine/threonine kinase
XP_057798134.1 Pfam PF00069 Pkinase Domain 125 276 4.3e-66 223.7 Protein kinase domain
XP_057798134.1 Pfam PF03109 ABC1 Domain 198 274 7.8e-07 29.2 ABC1 atypical kinase-like domain
XP_057798134.1 Pfam PF00069 Pkinase Domain 318 421 4.3e-66 223.7 Protein kinase domain
XP_057798134.1 Pfam PF00433 Pkinase_C Family 440 484 1.5e-09 39.2 Protein kinase C terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

8 records

下载 cDNA FASTA
XM_057942144.1
CACAACCATTAAAAACAAAACCCTATTTCCCCCTTTTTCCAATAAGTCAAATTGAAATAGTAATTTTTTTTGCTTATTTTATTTTCCTCCAAAAAGTTGACAATATAAATAGTGGAGAAAACGTTAGATCATGCGAAGGCTTTCAGCAGCGTCGGCGAGTTTTTGACGTTTAAGCAATTCCGGAATCAAGGACAGGAGTAGAAGTTTGTAACTATTGTAATACAGAGTTGCCTACAAACACACATTGTTCACAAGATGCT...
XM_057942143.1
GCGAAGGTGAGCTTTGTTTCCCAAAGCAGCGAAAATGGCGAATTTGTTTTCGGAACACTAAATATACAGTCGTAGTCAATCAATCAATTTCGGATTGCGATTATAACTACATGATAATATATATTTAAATCTGTATACGTGCACGCCTGTATTTCCCTGATCGGTTTTCTCTCTCTATCTCTAAAAGATTTGGCGGCTTTCAGCAGCGTCGGCGAGTTTTTGACGTTTAAGCAATTCCGGAATCAAGGACAGGAGTAGAA...

CDS

8 records

下载 CDS FASTA
LOC131014241
ATGGATTCAGCCAAAAGTTGGTTCCACAAGTTTCAACAAAGAGACCGTTTGAGGACATTGAGGACATTGACAAGGAAGAAAGACTCAATGGGTAGTGCAAGAGAAGAACCACCAGCAGACTTACTTGCTGATGAGGAAGCCTCAGCTCTCACAAAACAGAGGGTGGCTGCTGCAAAGCAGTATATAGAAAATCATTACAAGGAACAAATGAGGAATCTCCAGGAAAGGAGGCAGCGGAGAAATTTACTTGAAAAGAAGCT...
LOC131014241
ATGGATTCAGCCAAAAGTTGGTTCCACAAGTTTCAACAAAGAGACCGTTTGAGGACATTGAGGACATTGACAAGGAAGAAAGACTCAATGGGTAGTGCAAGAGAAGAACCACCAGCAGACTTACTTGCTGATGAGGAAGCCTCAGCTCTCACAAAACAGAGGGTGGCTGCTGCAAAGCAGTATATAGAAAATCATTACAAGGAACAAATGAGGAATCTCCAGGAAAGGAGGCAGCGGAGAAATTTACTTGAAAAGAAGCT...

Protein

8 records

下载 Protein FASTA
XP_057798126.1
MDSAKSWFHKFQQRDRLRTLRTLTRKKDSMGSAREEPPADLLADEEASALTKQRVAAAKQYIENHYKEQMRNLQERRQRRNLLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGCVYAMKKLRKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDVMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDRHGH...
XP_057798127.1
MDSAKSWFHKFQQRDRLRTLRTLTRKKDSMGSAREEPPADLLADEEASALTKQRVAAAKQYIENHYKEQMRNLQERRQRRNLLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTGCVYAMKKLRKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDVMTLLMRKDTLTEDEARFYVAETVLAIESIHKHHYIHRDIKPDNLLLDRHGH...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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