Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G003690`

染色体: Chr03 坐标: 55838321-55839949 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G003690`
名称	SmilChr03G003690
描述	BAG family molecular chaperone regulator 1-like
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	55838321 - 55839949 / `-`

ID 对照

NCBI Gene ID	`LOC131014556`
GeneID	`131014556`
locus_tag	`-`
NCBI Name	`LOC131014556`
原始查询	`SmilChr03G003690`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	BAG family molecular chaperone regulator 1-like
产物	BAG family molecular chaperone regulator 1-like
Arabidopsis	`AT5G07220` (BAG3) BCL-2-associated athano 3 [Source:NCBI gene (formerly Entrezgene);Acc:830613] identity=64.1; qcov=0.802; evalue=2.54e-92; confidence=high
Rice	`Os09g0524800` (OsBAG1) - identity=61.8; qcov=0.794; evalue=2.16e-86; confidence=high
GO	GO:0000774 (adenyl-nucleotide exchange factor activity); GO:0005737 (cytoplasm); GO:0050821 (protein stabilization); GO:0051087 (protein-folding chaperone binding)
KEGG	-
Pfam	PF02179 (BAG)
InterPro	-
eggNOG	-
NR	GeneID:131014556

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	0.80000	`XP_057798544.1`
2	Cytoplasm	细胞质	0.60000	`XP_057798544.1`
3	Nucleus	细胞核	0.20000	`XP_057798544.1`
4	Cell membrane	细胞膜	0.20000	`XP_057798544.1`
5	Chromosome	染色体	0.00000	`XP_057798544.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:55838591`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A10,B112,C58,C85
`Chr3:55838990`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B73
`Chr3:55839359`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A13,B90
`Chr3:55839373`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A13,B90,C9
`Chr3:55839375`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B6,B60,C10,C19,C2
`Chr3:55839383`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A9,B78,B98,C49
`Chr3:55839397`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B139,C52,D4
`Chr3:55839401`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A9,B139,B60,C19,C8
`Chr3:55839415`	`ACT`	`A`	2bp_deletion	frameshift_variant	1	C66
`Chr3:55839415`	`ACT`	`A`	2bp_deletion	CDS_variant	1	C66

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057798544.1

257 aa

128

257

BAG

PF02179 BAG 137-211 aa

XP_057798545.1

257 aa

128

257

BAG

PF02179 BAG 137-211 aa

XP_057798546.1

257 aa

128

257

BAG

PF02179 BAG 137-211 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057798544.1`	Pfam	`PF02179`	BAG	Family	137	211	5e-13	50.1	BAG domain
`XP_057798545.1`	Pfam	`PF02179`	BAG	Family	137	211	5e-13	50.1	BAG domain
`XP_057798546.1`	Pfam	`PF02179`	BAG	Family	137	211	5e-13	50.1	BAG domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057942562.1
CTGTTTGCTATCCATACATTTTCTTTACATGGCTGATCACTCTCTTTCTTCTGCAGTCTTGTTTCTCCAGCCAACCGGAGAGAGAGAGAGAGAGACAGACAGACCACCCTACTAAACAAAGCTTAATAATCATTTAATGGTTGTTTTTTTTATTCAATCATTTCTTGGCTGACATTGATTTTCACGACGAATCTCCACCGACCTAATCGATTGAATATATATTCTTGGCAGAGCGAGATATATACAGTTAGCCGTCAGGA...

XM_057942561.1
CTGTTTGCTATCCATACATTTTCTTTACATGGCTGATCACTCTCTTTCTTCTGCAGTCTTGTTTCTCCAGCCAACCGGAGAGAGAGAGAGAGAGACAGACAGACCACCCTACTAAACAAAGCTTAATAATCATTTAATGGTTGTTTTTTTTATTCAATCATTTCTTGGCTGACATTGATTTTCACGACGAATCTCCACCGACCTAATCGATTGAATATATATTCTTGGCAGAGCGAGATATATACAGTTAGCCGTCAGGA...

CDS

3 records

下载 CDS FASTA

LOC131014556
ATGACGAGCATCAATCCGCAAACCAACGGCGGCTTGGGCTTGAGAGAGTGGGAGCTGAGGCCCGGCGGAATGCTGGTCCAGAAACGCACCGACGCCGACCAAAACCGCGTGCCGCCGCCCACCATCCGCGTCCGGGTGAAATACGCTTCGATTTATCACGAAATCCATATCAGCTCACAAGCCACATTCGGGGAGTTGAAGAAGATGCTGACGGGGCGGACGGGGCTGCACCACGAGGATCAGAAGCTGGTATTCAAGGA...

Protein

3 records

下载 Protein FASTA

XP_057798544.1
MTSINPQTNGGLGLREWELRPGGMLVQKRTDADQNRVPPPTIRVRVKYASIYHEIHISSQATFGELKKMLTGRTGLHHEDQKLVFKEKERDSKAFLDTAGVKDKSKMVLEEDPISQEKRYLEMRKTAIFEKAAKIVSQISLDLDRLAAQVSDLESAISRGGKVAEKDVVSLVELLMNELLKLESITADGDVKLQKKMQVRRVHKYVEALDLMKMKLVAVQQQQAVVITTHWETFDSIPTTSKQGQEGQPSNFTWNLL

XP_057798545.1
MTSINPQTNGGLGLREWELRPGGMLVQKRTDADQNRVPPPTIRVRVKYASIYHEIHISSQATFGELKKMLTGRTGLHHEDQKLVFKEKERDSKAFLDTAGVKDKSKMVLEEDPISQEKRYLEMRKTAIFEKAAKIVSQISLDLDRLAAQVSDLESAISRGGKVAEKDVVSLVELLMNELLKLESITADGDVKLQKKMQVRRVHKYVEALDLMKMKLVAVQQQQAVVITTHWETFDSIPTTSKQGQEGQPSNFTWNLL

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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