当前解析结果
SmilChr03G003764| 统一新 Gene ID | SmilChr03G003764 |
|---|---|
| 名称 | SmilChr03G003764 |
| 描述 | uncharacterized SmilChr03G003764 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 56786663 - 56789381 / + |
| NCBI Gene ID | LOC131014622 |
|---|---|
| GeneID | 131014622 |
| locus_tag | - |
| NCBI Name | LOC131014622 |
| 原始查询 | SmilChr03G003764 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | polypyrimidine tract-binding-like protein [Source:NCBI gene (formerly Entrezgene);Acc:832478]; symbol=AT5G24130; hit=AT5G24130; species=arabidopsis; confidence=high |
| 产物 | polypyrimidine tract-binding-like protein [Source:NCBI gene (formerly Entrezgene);Acc:832478]; symbol=AT5G24130; hit=AT5G24130; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G24130 (AT5G24130)polypyrimidine tract-binding-like protein [Source:NCBI gene (formerly Entrezgene);Acc:832478] identity=59; qcov=0.963; evalue=3.3e-118; confidence=high |
| Rice | Os02g0257200- identity=46.5; qcov=0.966; evalue=9.63e-76; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131014622 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Vacuole | 液泡 | 0.60000 | XP_057798627.1 |
| 2 | Vacuole membrane | 液泡膜 | 0.60000 | XP_057798627.1 |
| 3 | Cell membrane | 细胞膜 | 0.20000 | XP_057798627.1 |
| 4 | Golgi apparatus | 高尔基体 | 0.20000 | XP_057798627.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057798627.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:56786989 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B123,B14,B50 |
Chr3:56787823 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr3:56788736 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C36,C39,C69 |
Chr3:56788867 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr3:56789245 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr3:56789258 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B127,C7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。