当前解析结果
SmilChr03G003849| 统一新 Gene ID | SmilChr03G003849 |
|---|---|
| 名称 | SmilChr03G003849 |
| 描述 | uncharacterized SmilChr03G003849 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 57591863 - 57595905 / + |
| NCBI Gene ID | LOC131014729 |
|---|---|
| GeneID | 131014729 |
| locus_tag | - |
| NCBI Name | LOC131014729 |
| 原始查询 | SmilChr03G003849 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:835382]; symbol=AT5G53030; hit=AT5G53030; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:835382]; symbol=AT5G53030; hit=AT5G53030; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G53030 (AT5G53030)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:835382] identity=32.3; qcov=1.13; evalue=6.76e-12; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131014729 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057798792.1 |
| 2 | Cell membrane | 细胞膜 | 0.40000 | XP_057798792.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057798792.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057798792.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057798792.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:57591920 |
A |
AG |
1bp_insertion | frameshift_variant | 4 | B122,B37,C36,C49 |
Chr3:57591920 |
A |
AG |
1bp_insertion | CDS_variant | 4 | B122,B37,C36,C49 |
Chr3:57591996 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C11,C39,C69 |
Chr3:57592110 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A16 |
Chr3:57592131 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr3:57592247 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A2,B122,B139,C35,D5 |
Chr3:57595750 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B68,C44 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。