当前解析结果
SmilChr03G004068| 统一新 Gene ID | SmilChr03G004068 |
|---|---|
| 名称 | SmilChr03G004068 |
| 描述 | uncharacterized SmilChr03G004068 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 59658877 - 59662048 / - |
| NCBI Gene ID | LOC131019077 |
|---|---|
| GeneID | 131019077 |
| locus_tag | - |
| NCBI Name | LOC131019077 |
| 原始查询 | SmilChr03G004068 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | embryo defective 3006 [Source:NCBI gene (formerly Entrezgene);Acc:827676]; symbol=EMB3006; hit=AT4G19350; species=arabidopsis; confidence=medium |
| 产物 | embryo defective 3006 [Source:NCBI gene (formerly Entrezgene);Acc:827676]; symbol=EMB3006; hit=AT4G19350; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G19350 (EMB3006)embryo defective 3006 [Source:NCBI gene (formerly Entrezgene);Acc:827676] identity=45.6; qcov=0.784; evalue=3.32e-33; confidence=medium |
| Rice | Os08g0162500- identity=44.5; qcov=0.676; evalue=4.16e-28; confidence=medium |
| GO | GO:0000444 (MIS12/MIND type complex); GO:0007059 (chromosome segregation) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019077 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803742.1 |
| 2 | Chromosome | 染色体 | 1.00000 | XP_057803742.1 |
| 3 | Centromere | 着丝粒 | 0.80000 | XP_057803742.1 |
| 4 | Spindle | Spindle | 0.20000 | XP_057803742.1 |
| 5 | Spindle pole body | Spindle pole body | 0.20000 | XP_057803742.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:59659301 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B48,C78 |
Chr3:59659333 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B20,C64,C66 |
Chr3:59659920 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B130,C43 |
Chr3:59661764 |
CTG |
C |
2bp_deletion | frameshift_variant | 9 | A10,B30,B72,C42,C58,C60,C7,C85,D6 |
Chr3:59661768 |
G |
GTT |
2bp_insertion | frameshift_variant | 9 | A10,B30,B72,C42,C58,C60,C7,C85,D6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。