Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G004130`

染色体: Chr03 坐标: 60132350-60138541 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G004130`
名称	SmilChr03G004130
描述	uncharacterized SmilChr03G004130
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	60132350 - 60138541 / `-`

ID 对照

NCBI Gene ID	`LOC131014998`
GeneID	`131014998`
locus_tag	`-`
NCBI Name	`LOC131014998`
原始查询	`SmilChr03G004130`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:829261]; symbol=AT4G31340; hit=AT4G31340; species=arabidopsis; confidence=high
产物	myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:829261]; symbol=AT4G31340; hit=AT4G31340; species=arabidopsis; confidence=high
Arabidopsis	`AT4G31340` (AT4G31340) myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:829261] identity=55; qcov=0.948; evalue=1.38e-160; confidence=high
Rice	`Os08g0519400` (BIP129) - identity=53.4; qcov=0.867; evalue=8.27e-144; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131014998

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057799164.1`
2	Endoplasmic reticulum membrane	内质网膜	0.60000	`XP_057799164.1`
3	Nucleus membrane	核膜	0.40000	`XP_057799164.1`
4	Nucleus	细胞核	0.00000	`XP_057799164.1`
5	Chromosome	染色体	0.00000	`XP_057799164.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:60132965`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B118
`Chr3:60132992`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B97
`Chr3:60133326`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B112
`Chr3:60134368`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B128,B75,C53,D10
`Chr3:60134406`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B118
`Chr3:60134449`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C19
`Chr3:60134452`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B140,B64,C48,C73
`Chr3:60134561`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A22
`Chr3:60134574`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B128,B75,C33,C53,D10
`Chr3:60135058`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B112
`Chr3:60135183`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B135,B82,C82
`Chr3:60135195`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057943182.1
GACCGAGGCAAGTGCTCCAAGTCCACAGCAAACGACATTTCACATAGTTCATATCTAAAAAAACTACCTAGCGCAACGTGGGTTTCTCACATAAACACACATCACGCACTCAGATTGTGTGAAAGAAAGGGAAACATTTTCCGAACCCCCAAAAATCTCAAACCTCGGATACCTGCTGAAAATCCGATCGCCGGAGCTACCGTCAGCGGCGTTATGGCGGCGTTGAAACTGTTCCTGCTTACTGTATTCATCTCTCTAGT...

XM_057943181.1
GACCGAGGCAAGTGCTCCAAGTCCACAGCAAACGACATTTCACATAGTTCATATCTAAAAAAACTACCTAGCGCAACGTGGGTTTCTCACATAAACACACATCACGCACTCAGATTGTGTGAAAGAAAGGGAAACATTTTCCGAACCCCCAAAAATCTCAAACCTCGGATACCTGCTGAAAATCCGATCGCCGGAGCTACCGTCAGCGGCGTTATGGCGGCGTTGAAACTGTTCCTGCTTACTGTATTCATCTCTCTAGT...

CDS

2 records

下载 CDS FASTA

LOC131014998
ATGGCGGCGTTGAAACTGTTCCTGCTTACTGTATTCATCTCTCTAGTTCTCGCTCACGTCGGAGCTCGAGCTGATGCCTCAGTCTCAGATGTCGAAGAAGTCAAAGTCGCCGGATCGGACGGTCCAGATTCTGCCGTCCTCGAGCAACTTAAGTCCAAGATCCACAGCCTAGAATCTCAGATTGAGGAGAAAATTCGAGAACTAAAAGAAAAGGACCATGCAGTTGCAGCTAAGGAAAAGATAATCAAGGAAAAATCAGA...

Protein

2 records

下载 Protein FASTA

XP_057799164.1
MAALKLFLLTVFISLVLAHVGARADASVSDVEEVKVAGSDGPDSAVLEQLKSKIHSLESQIEEKIRELKEKDHAVAAKEKIIKEKSDAVVSLKSEIASLHKKGKLDAAEKVGKAHARAGELEKEVEKLRKDLHLKTTEKDLLEARVTEAEKKFPELNSKLASLQKIIDDQKAKIRKTQRALEIAEEELMKAKFEATSRTKELMQAHGAWFPPWLAVHLNNYQALLEENWKVHGKPALESLVKKATEKKAQAEEWAAPHVE...

XP_057799165.1
MAALKLFLLTVFISLVLAHVGARADASVSDVEEVKVAGSDGPDSAVLEQLKSKIHSLESQIEEKIRELKEKDHAVAAKEKIIKEKSDAVVSLKSEIASLHKKGKLDAAEKVGKAHARAGELEKEVEKLRKDLHLKTTEKDLLEARVTEAEKKFPELNSKLASLQKIIDDQKAKIRKTQRALEIAEEELMKAKFEATSRTKELMQAHGAWFPPWLAVHLNNYQALLEENWKVHGKPALESLVKKATEKKAQAEEWAAPHVE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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