当前解析结果
SmilChr03G004339| 统一新 Gene ID | SmilChr03G004339 |
|---|---|
| 名称 | SmilChr03G004339 |
| 描述 | uncharacterized SmilChr03G004339 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 61707763 - 61711498 / - |
| NCBI Gene ID | LOC131015287 |
|---|---|
| GeneID | 131015287 |
| locus_tag | - |
| NCBI Name | LOC131015287 |
| 原始查询 | SmilChr03G004339 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817108]; symbol=AT2G25670; hit=AT2G25670; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817108]; symbol=AT2G25670; hit=AT2G25670; species=arabidopsis; confidence=medium |
| Arabidopsis | AT2G25670 (AT2G25670)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817108] identity=58; qcov=1.02; evalue=6.45e-38; confidence=medium |
| Rice | Os01g0179300 (BIP128)- identity=46.5; qcov=1.06; evalue=5.59e-29; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015287 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057799617.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057799617.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057799617.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057799617.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057799617.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:61708064 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B119,B44,B65,C62 |
Chr3:61708157 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A7,C43 |
Chr3:61708241 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A4,B113,B15,C34 |
Chr3:61708816 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B71,D11 |
Chr3:61708850 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C42 |
Chr3:61708861 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B122 |
Chr3:61708882 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B114,B66,B69 |
Chr3:61708948 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B119,B44,B65,C62 |
Chr3:61710589 |
CA |
C |
1bp_deletion | frameshift_variant | 1 | B136 |
Chr3:61710589 |
CA |
C |
1bp_deletion | CDS_variant | 1 | B136 |
Chr3:61710727 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B27,C54 |
Chr3:61710767 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B128,B32,D2,D8 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。