当前解析结果
SmilChr03G004417| 统一新 Gene ID | SmilChr03G004417 |
|---|---|
| 名称 | SmilChr03G004417 |
| 描述 | uncharacterized SmilChr03G004417 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 62334058 - 62335778 / + |
| NCBI Gene ID | LOC131015310 |
|---|---|
| GeneID | 131015310 |
| locus_tag | - |
| NCBI Name | LOC131015310 |
| 原始查询 | SmilChr03G004417 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | polyamine-modulated factor 1-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:832632]; symbol=AT5G25570; hit=AT5G25570; species=arabidopsis; confidence=medium |
| 产物 | polyamine-modulated factor 1-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:832632]; symbol=AT5G25570; hit=AT5G25570; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G25570 (AT5G25570)polyamine-modulated factor 1-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:832632] identity=50; qcov=0.961; evalue=6.97e-25; confidence=medium |
| Rice | Os05g0180700- identity=32.1; qcov=0.824; evalue=1.24e-12; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015310 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chromosome | 染色体 | 1.00000 | XP_057799652.1 |
| 2 | Spindle | Spindle | 1.00000 | XP_057799652.1 |
| 3 | Nucleus | 细胞核 | 0.80000 | XP_057799652.1 |
| 4 | Centromere | 着丝粒 | 0.60000 | XP_057799652.1 |
| 5 | Cytoplasm | 细胞质 | 0.60000 | XP_057799652.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:62334198 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B125,B20,B22,B78 |
Chr3:62335358 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr3:62335361 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B119,B59,B89 |
Chr3:62335393 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B48 |
Chr3:62335400 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A4,B24 |
Chr3:62335452 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C56 |
Chr3:62335465 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr3:62335482 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A18 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。