当前解析结果
SmilChr03G004527| 统一新 Gene ID | SmilChr03G004527 |
|---|---|
| 名称 | SmilChr03G004527 |
| 描述 | uncharacterized SmilChr03G004527 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 63314819 - 63318265 / + |
| NCBI Gene ID | LOC131015434 |
|---|---|
| GeneID | 131015434 |
| locus_tag | - |
| NCBI Name | LOC131015434 |
| 原始查询 | SmilChr03G004527 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Thioredoxin superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831036]; symbol=AT5G11640; hit=AT5G11640; species=arabidopsis; confidence=high |
| 产物 | Thioredoxin superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831036]; symbol=AT5G11640; hit=AT5G11640; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G11640 (AT5G11640)Thioredoxin superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831036] identity=55.8; qcov=0.961; evalue=1.48e-98; confidence=high |
| Rice | Os01g0200400- identity=51.2; qcov=0.973; evalue=9.45e-87; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015434 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057799820.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057799820.1 |
| 3 | Nucleus membrane | 核膜 | 0.20000 | XP_057799820.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057799820.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057799820.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:63315016 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B72 |
Chr3:63315040 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | D10,D3 |
Chr3:63315185 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr3:63315189 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C1 |
Chr3:63315478 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B139,B46,B72,C9 |
Chr3:63316007 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B56,B96 |
Chr3:63317529 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B120 |
Chr3:63317546 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr3:63317828 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B111 |
Chr3:63317834 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B45 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。