当前解析结果
SmilChr03G004583| 统一新 Gene ID | SmilChr03G004583 |
|---|---|
| 名称 | SmilChr03G004583 |
| 描述 | uncharacterized SmilChr03G004583 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 63688276 - 63694295 / + |
| NCBI Gene ID | LOC131015368 |
|---|---|
| GeneID | 131015368 |
| locus_tag | - |
| NCBI Name | LOC131015368 |
| 原始查询 | SmilChr03G004583 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | P0025A05.39-1; symbol=P0025A05.39-1; hit=Os01g0600300; species=rice; confidence=low |
| 产物 | P0025A05.39-1; symbol=P0025A05.39-1; hit=Os01g0600300; species=rice; confidence=low |
| Arabidopsis | AT5G11780 (AT5G11780)SNF2 domain protein [Source:NCBI gene (formerly Entrezgene);Acc:831050] identity=30.6; qcov=1.01; evalue=7.38e-60; confidence=low |
| Rice | Os01g0600300 (P0025A05.39-1)- identity=31.9; qcov=1.02; evalue=1.04e-61; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015368 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057799731.1 |
| 2 | Nucleus membrane | 核膜 | 0.20000 | XP_057799731.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057799731.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057799731.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057799731.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:63688785 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C10,C18,C53 |
Chr3:63688845 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B99 |
Chr3:63689113 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr3:63689191 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C84 |
Chr3:63689251 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D1 |
Chr3:63692730 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C48 |
Chr3:63692769 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B123 |
Chr3:63692771 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr3:63693655 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B104,B44,D5 |
Chr3:63693697 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B123 |
Chr3:63693722 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B133,C28,C56,D5 |
Chr3:63693730 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B104,B44,B76,D5 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。