Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G004588`

染色体: Chr03 坐标: 63722991-63730020 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G004588`
名称	SmilChr03G004588
描述	K(+) efflux antiporter 4-like
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	63722991 - 63730020 / `-`

ID 对照

NCBI Gene ID	`LOC131015357`
GeneID	`131015357`
locus_tag	`-`
NCBI Name	`LOC131015357`
原始查询	`SmilChr03G004588`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	K(+) efflux antiporter 4-like
产物	K(+) efflux antiporter 4-like
Arabidopsis	`AT2G19600` (KEA4) K+ efflux antiporter 4 [Source:NCBI gene (formerly Entrezgene);Acc:816479] identity=81.9; qcov=0.927; evalue=0; confidence=high
Rice	`Os06g0561200` - identity=79.5; qcov=0.904; evalue=0; confidence=high
GO	GO:0015386 (potassium:proton antiporter activity); GO:0016020 (membrane); GO:0071805 (potassium ion transmembrane transport); GO:1902600 (proton transmembrane transport)
KEGG	-
Pfam	PF00999 (Na_H_Exchanger)
InterPro	-
eggNOG	-
NR	GeneID:131015357

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Golgi apparatus	高尔基体	1.00000	`XP_057799714.1`
2	Trans-golgi network	Trans-golgi network	0.80000	`XP_057799714.1`
3	Vacuole membrane	液泡膜	0.40000	`XP_057799714.1`
4	Cytoplasmic vesicle	细胞质囊泡	0.20000	`XP_057799714.1`
5	Secretory vesicle	Secretory vesicle	0.20000	`XP_057799714.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:63723571`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C77
`Chr3:63723754`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B44,B78,B93,C8
`Chr3:63724180`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B88
`Chr3:63724427`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	C11,C69,C76
`Chr3:63724653`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B37,B45,B50,C47
`Chr3:63724712`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B42,B43,C46
`Chr3:63724850`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B27,B88,C38,C49,C6
`Chr3:63725837`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A22,B64
`Chr3:63725862`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A2,B22,C48
`Chr3:63726068`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B42,B43,C46
`Chr3:63726647`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A22
`Chr3:63726649`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A22,B120,B140,B5,D2

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057799714.1

585 aa

292

585

Na_H_Exchanger

PF00999 Na_H_Exchanger 168-534 aa

XP_057799715.1

561 aa

280

561

Na_H_Exchanger

PF00999 Na_H_Exchanger 168-534 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057799714.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	168	534	1.4e-74	251.9	Sodium/hydrogen exchanger, transmembrane
`XP_057799715.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	168	534	1.3e-74	252.1	Sodium/hydrogen exchanger, transmembrane

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XR_009098498.1
TATTACGCAAACCCAACAATTTTCGCAATTCTCTCTCTCTCTCTCTCTCTCTACATCTCTCTCTCTCCCTCTCTAGAATTCACACACTCTTTGGGTAGTGTAGTAGCTGTATCACAACTTGCGCCTGCGCTGCACCGTTGCGGATAGCGACAAGCAAGCTAACCGACACTCCGCCGCCGACGAATCCGAGCGCCGGGGCCTGCTTCGCGTGCGCCGCCGGCGGTGCTGCCTCCAGATGAGTAGATCGCTAGCCGCCGTCG...

XM_057943732.1
ATTACGCAAACCCAACAATTTTCGCAATTCTCTCTCTCTCTCTCTCTCTCTACATCTCTCTCTCTCCCTCTCTAGAATTCACACACTCTTTGGGTAGTGTAGTAGCTGTATCACAACTTGCGCCTGCGCTGCACCGTTGCGGATAGCGACAAGCAAGCTAACCGACACTCCGCCGCCGACGAATCCGAGCGCCGGGGCCTGCTTCGCGTGCGCCGCCGGCGGTGCTGCCTCCAGATGAGTAGATCGCTAGCCGCCGTCGT...

CDS

2 records

下载 CDS FASTA

LOC131015357
ATGAGTAGATCGCTAGCCGCCGTCGTCTTACTGGCAATGGCGCTGGTCGCCGCCGCGGCGTCGGAGGATTCGAAGCTGGTCGAGGAGGGGGACGTCGCCGCTGCCGCCTTCTCCAATGCGACTGGCACTGAGCTCAGTGGGAATAAGACCAGGCCGAAGGAGGACACGTTTGCTGATATGATCGATCGCGCGCTCGAGAAGGAGTTCACGGAGAATGAGGATCATAGTGAAGCAAATGATGCTGGTAGCTTCAACAACAG...

Protein

2 records

下载 Protein FASTA

XP_057799714.1
MSRSLAAVVLLAMALVAAAASEDSKLVEEGDVAAAAFSNATGTELSGNKTRPKEDTFADMIDRALEKEFTENEDHSEANDAGSFNNSVAEQQAVLETVARVKPKKNETKEEKSFKFNQVFNLDNDNGAEETPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVLTGYLLAGSLVGPGGLNVISEMVQVETVAQFGVIFLLFALGLEFSATKLRVVRAVAILGGLLQILFFMCLCGIIA...

XP_057799715.1
MSRSLAAVVLLAMALVAAAASEDSKLVEEGDVAAAAFSNATGTELSGNKTRPKEDTFADMIDRALEKEFTENEDHSEANDAGSFNNSVAEQQAVLETVARVKPKKNETKEEKSFKFNQVFNLDNDNGAEETPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVLTGYLLAGSLVGPGGLNVISEMVQVETVAQFGVIFLLFALGLEFSATKLRVVRAVAILGGLLQILFFMCLCGIIA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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